Transcript Information: R_Transcript_127487.p1


Annotated TAIR IDAT5G52560.1
Annotated Gene NameUDP-sugar pyrophosphorylase
Annotated Gene Symbol(s)ATUSP, USP
Annotation TypeOrtholog
Chromosome Positionchr5:21331230-21334573 | Forward length=614
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.717008382658
Replicate 216.654577551539
Replicate 316.023614505871
Condition 2: 8 Hour
Replicate 115.427281630736
Replicate 219.398697170786
Replicate 321.729149385633
Condition 3: 24 Hour
Replicate 120.250343693581
Replicate 218.812886420396
Replicate 318.705324360854


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127487.p1 GENE.R_Transcript_127487~~R_Transcript_127487.p1 ORF type:complete len:619 (+),score=156.45,UDPGP|PF01704.14|2.6e-15 R_Transcript_127487:95-1951(+)
ATGGCGTCGGTCACCGACACGCTCGCTAACCTCAACATTGATGACCTCAATTGCCCTAATCTCCAGAAGAATCTCAAACTTCTCTCTCCTCAACATGTGGAGTTAGCGAAGATGTTGATCGAGAATGGACAGAATCATCTCTTTGATGACTGGCCTGGACCTGGTGTTGATGATGAAGAGAAACATGCCTTCTTTGATCAGGTCGCCCTTCTTAATGGAAGCTACCCTGGTGGTCTTGTACAGTACATAAAAAATGCACGAGAGCTCCTAGCAGATTCAAAAGCAGGGAAGAATCCCTTTGATGGCTTTACGCCTTCAGTGCCAACTGGTGAGAATTTGACTTTTGCGGATGATAATTTCATAAAATACGAAGAGATAGGCGTTAAGGAAGCCAAAAATGCTGCATTTGTTCTTGTTGCTGGTGGACTTGGGGAACGTCTTGGGTACAATGGAATCAAGGTTGCCCTGCCATCAGAAACTTCCACAGGAACATGTTTCTTACAGCTTTACATAGAGGCAATTCTTGCTCTTCAAGAAGCTAGCTGCAAGTTGGCTGGAGGTGAACCTCAGGAGATACCTTTTGCTATTATGACTTCTGATGACACGCATGCACGCACATTGGAGCTTCTTGAGACTAATGCTTATTTTGGGATGAAATCCACACAAGTCACACTCCTAAAGCAGGAAAAAGTTGCCTGCTTAGCTGACAATGATGCCAAGCTTGCAGTGGACCCAAAAAATAAATACAGAATTCAGACAAAACCTCATGGCCACGGTGATGTGCATTCACTTTTATATTCAACCGGCCTTGTGTACAAATGGCGTGATGCTGGTGTGAAATGGGTTTTGTTCTTCCAGGATACAAATGGACTTCTGTTCAAGGCAATTCCAGCATCATTGGGGGTCAGTGCCACCAAGCAATACCAGGTTAACTCCCTTGCAGTTCCACGTAAGGCAAAAGAAGCTATTGGAGGCATTGCTAAACTTACCCATGCTGATGGGAGGTCAATGGTGATCAATGTGGAGTACAATCAGCTTGATCCTCTGCTTAGAGCAACTATAAACCCTGAAGGAGATGTCAACTGTGAGACTGGATTCTCACCTTTTCCTGGAAATATTAATCAGTTAATTTTGGAACTTGAATCATACATTGAGGAACTGAAGAAAACAGGTGGTGCCATCAAGGAGTTTGTTAACCCAAAGTACAAAGATGCTAGCAAGAGTTCATTTAAGTCTTCCACTCGATTGGAGTGTATGATGCAGGACTACCCAAAGACTCTACCTCCAACAGCAAGGGTTGGATTTACTGTGATGGATACATGGCTTGCATATGCGCCTGTGAAAAACAACCCTGAGGATGCTGCCAAGGTTCCAAAGGGTAATCCATATCATAGTGCAACTTCTGGTGAAATGGCTATCTATAGAGCACACAGCCTTATCTTGAGAAAGGCCGGTGTAAAAATTGGTGACCCAGTCTTGCAAGTGTTTAACGGGCAAGAAGTGGAGGTGTGGCCTCGCATTGTATGGAAGCCGAAATGGGCTTTGACATTTTCAGATGTTAAAAGAACAATAGAAGGAAATTGCTCTGTTTCTCAAAGGTCAACCATGGTTGTCAAGGGCCGTAATGTTTTTATTGAAGGACTCTCGTTGGACGGCGCCCTTGTTGTTGACTCAGTTGATGATGCAGAGGTGAAAGTGGAAGGTTCAGTGCAAAACAAGGGTTGGGTCCTGGAAAATGTTGATTACAAAGATACATCGCAGCCTGAAGAAATTAGGACCAGAGGCTTCAAAATAAACAGGATAGAGCAGCTTGAGGGGAATTTCCTTGAGCCTGGAAAACATTGCTTGAAGCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127487.p1 GENE.R_Transcript_127487~~R_Transcript_127487.p1 ORF type:complete len:619 (+),score=156.45,UDPGP|PF01704.14|2.6e-15 R_Transcript_127487:95-1951(+)
MASVTDTLANLNIDDLNCPNLQKNLKLLSPQHVELAKMLIENGQNHLFDDWPGPGVDDEEKHAFFDQVALLNGSYPGGLVQYIKNARELLADSKAGKNPFDGFTPSVPTGENLTFADDNFIKYEEIGVKEAKNAAFVLVAGGLGERLGYNGIKVALPSETSTGTCFLQLYIEAILALQEASCKLAGGEPQEIPFAIMTSDDTHARTLELLETNAYFGMKSTQVTLLKQEKVACLADNDAKLAVDPKNKYRIQTKPHGHGDVHSLLYSTGLVYKWRDAGVKWVLFFQDTNGLLFKAIPASLGVSATKQYQVNSLAVPRKAKEAIGGIAKLTHADGRSMVINVEYNQLDPLLRATINPEGDVNCETGFSPFPGNINQLILELESYIEELKKTGGAIKEFVNPKYKDASKSSFKSSTRLECMMQDYPKTLPPTARVGFTVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRAHSLILRKAGVKIGDPVLQVFNGQEVEVWPRIVWKPKWALTFSDVKRTIEGNCSVSQRSTMVVKGRNVFIEGLSLDGALVVDSVDDAEVKVEGSVQNKGWVLENVDYKDTSQPEEIRTRGFKINRIEQLEGNFLEPGKHCLKP*

Click here to download the sequence:
Link to NCBI Protein BLAST