Transcript Information: R_Transcript_127590.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value9E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24133678639423
Replicate 30
Condition 2: 8 Hour
Replicate 10.28144672353155
Replicate 20.77106489107537
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127590.p1 GENE.R_Transcript_127590~~R_Transcript_127590.p1 ORF type:internal len:87 (+),score=6.32,gag_pre-integrs|PF13976.2|7.6e-08,gag_pre-integrs|PF13976.2|5e+03 R_Transcript_127590:3-260(+)
CATATGCGTTTGGGACATATGGTTGAGAAAGGCATGTATATTCTCTGTAAGCGTGGTTTGCTTGGCTCAACTAATAATTGTGAAATTGATTTTTGTGAGCATTGTGTATATGGCAAGCAAAAGAGAGTTAACTTCTCACCGGCAATTCATAGAACCAAAAATACTCTTGACTATGTCCACTCCGACTTGTGGGGCCCTTCACAAGTTGCCACCAGCACAGTTAATTGTTATATAATGACTATTATTGATGATTACTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127590.p1 GENE.R_Transcript_127590~~R_Transcript_127590.p1 ORF type:internal len:87 (+),score=6.32,gag_pre-integrs|PF13976.2|7.6e-08,gag_pre-integrs|PF13976.2|5e+03 R_Transcript_127590:3-260(+)
HMRLGHMVEKGMYILCKRGLLGSTNNCEIDFCEHCVYGKQKRVNFSPAIHRTKNTLDYVHSDLWGPSQVATSTVNCYIMTIIDDYS

Click here to download the sequence:
Link to NCBI Protein BLAST