Transcript Information: R_Transcript_127595.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.82517906666902
Replicate 21.2909117796639
Replicate 30.4556493916052
Condition 2: 8 Hour
Replicate 10.30994765756007
Replicate 20.72784063859194
Replicate 30.75494944714087
Condition 3: 24 Hour
Replicate 11.0378755527895
Replicate 20.39882927469398
Replicate 32.3747961685603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127595.p1 GENE.R_Transcript_127595~~R_Transcript_127595.p1 ORF type:internal len:553 (+),score=81.19,rve|PF00665.22|7.4e-23,gag_pre-integrs|PF13976.2|1.3e-16,gag_pre-integrs|PF13976.2|2.5e+03 R_Transcript_127595:1-1656(+)
ACTAATTTAACTTTTCAAGAAGTTAAAACTAATCTATTCTCTAAGGAGAAATTTGATGCCGAACATGATAAGAATGATTCTAGAGATGAAGGTTTGTTTGCTAGAGGTAGACCCTCTAATAAGTCAGAGAAGAATTACCGTGGTGGTGGTAGGTCTAAATCTAGAGGGAAGAACTCTCACAAAACCTGCAAGTATTGTAAGAAACTCGGACATGTAGTTGATGATTGTTACAAATTGAAGAATAAACTTGAAAGAGAGGAAAAGGCTATGGGTACGAAACCTATTGAAACACATGCCAAGGCGGGAGTCGTTGAAAATCACTCCGATGGTGATTTATTTGTAGCCTTTGATTCTGATGAAAGGGATAGATCTCAATGGATTCTTGACTCCGGTTGTACCTTCCACATGTGTCCACATCGTGATTGTTTTGACTCTTATGAGAGTGTTGATGGTGGCACCGTCTTCATGGGTAACAATGCAAGGTGTAAGGTTATCGGGAAAGGAAATATTAAGATCAAAGTTCATGATGGAACTATTTGCACACTTTCGGGTGTGAGACATGTACCCGACCTTCGAAGGAATCTCATTTCTTTAGGCACCCTAGAATCATTGGGTTGCCACTACTCCGCTCAAGGTGGAGTGCTCAAAGTGTCTAGGGGTGTTCTTGTTTTGATGAAAGGCTCAAGAATTGGATCGTTGTATGTTTTGAAAGGTTCTACCATCACAGGCTCCACCGCCATTGCTTCCACATCCACTACCAATGAATCAAAATTATGGCACATGCGATTGGGGCATATGGGAGAGAAAGGTATGGATATTCTTTGCAAGCGTGGTTTTCTTGGCTCACTTTCACAATTCGAGATTGAATTTTGTGAGCATTGTGTTTATGGGAAACAAAAGAGAGTTAGCTTCTCTCCGAGAACATATAGGACCAAGGCCACTCTTGACTATGTTCACTCTGATTTGTGGGGTCCTTCACAAGTTGCTACAACGGGAGGTAACCGCTACATGTTGACAATCATTGATGACTACTCAAGAAAGGTTTTGGTATATTTTTTGAAGCACAAGAATGAGTCCCTAGACAAGTTTAAGGAGTTGAAGACTTTGCTTGAAAATCAAACCGGGAAAAAGCTCAAGAGATTAAGGATCGACAATGGTCTTGAATTTTGTGATAATGAATTCAAGGAGTTTTGCAAGAAGGAAGGTGTTGCTAGGCAGCTCACTATTGTTGGCAAGCCACAACAAAATGGTGTTGCTGAGACAATGAATCGAATCATTATGGAGAAGGTTCGTTGCATGCTTTCCACAGCCGGCTTATGGGAACGTCGTCATTTGTGGGGTGAAGCGGCCAACACCGCTTGTTATCTCATCAATCGCTCGCCTCACTGCTCACTTGACGGGAGGATTCCTGTGGAGGTATGGTCCGGTAAACCAATCGATTATTCTAATCTTCGTGTATTTGGTTGTCCGGTATATATTCATATAAATGAGGGTAAATTGTCATCTTGTGCTAAAAAGTGTATCTTCGTTGGCTATGGCAGTGGTGTTAAAGGGTATCGTATATATGATCCCGAGACACATAAGATTTTGCATAGTAGAGATATTACTTTTCATGAGAATATTACTCCTTCGGGCATTTTGTCTTTCTATTCTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127595.p1 GENE.R_Transcript_127595~~R_Transcript_127595.p1 ORF type:internal len:553 (+),score=81.19,rve|PF00665.22|7.4e-23,gag_pre-integrs|PF13976.2|1.3e-16,gag_pre-integrs|PF13976.2|2.5e+03 R_Transcript_127595:1-1656(+)
TNLTFQEVKTNLFSKEKFDAEHDKNDSRDEGLFARGRPSNKSEKNYRGGGRSKSRGKNSHKTCKYCKKLGHVVDDCYKLKNKLEREEKAMGTKPIETHAKAGVVENHSDGDLFVAFDSDERDRSQWILDSGCTFHMCPHRDCFDSYESVDGGTVFMGNNARCKVIGKGNIKIKVHDGTICTLSGVRHVPDLRRNLISLGTLESLGCHYSAQGGVLKVSRGVLVLMKGSRIGSLYVLKGSTITGSTAIASTSTTNESKLWHMRLGHMGEKGMDILCKRGFLGSLSQFEIEFCEHCVYGKQKRVSFSPRTYRTKATLDYVHSDLWGPSQVATTGGNRYMLTIIDDYSRKVLVYFLKHKNESLDKFKELKTLLENQTGKKLKRLRIDNGLEFCDNEFKEFCKKEGVARQLTIVGKPQQNGVAETMNRIIMEKVRCMLSTAGLWERRHLWGEAANTACYLINRSPHCSLDGRIPVEVWSGKPIDYSNLRVFGCPVYIHINEGKLSSCAKKCIFVGYGSGVKGYRIYDPETHKILHSRDITFHENITPSGILSFYSN

Click here to download the sequence:
Link to NCBI Protein BLAST