Transcript Information: R_Transcript_127600.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value6E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70203695979687
Replicate 20.35891111822732
Replicate 30.78313632807359
Condition 2: 8 Hour
Replicate 10.1046404484925
Replicate 20.66891526875342
Replicate 30.77570985557209
Condition 3: 24 Hour
Replicate 10.39244114919152
Replicate 20.18850648624425
Replicate 30.28061159854997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127600.p1 GENE.R_Transcript_127600~~R_Transcript_127600.p1 ORF type:internal len:234 (+),score=34.80,rve|PF00665.22|2.5e-23,gag_pre-integrs|PF13976.2|2.7e-17 R_Transcript_127600:2-700(+)
ACCCTTGAATCTTTAGGTTGTCACTACTCCGCTCAAGGTGGAGTTCTTAAGGTGTCTAAGGGTTCTCTTGTGTTGATGAAAGGCTCTAGAGTTGGGTCTTTGTATGTCTTGCAAGGTTCTACCATCACCGGTTCTGCCGCCATTGCTTCCACATCCAATACCAATGAACCCAAACTTTGGCATATGCGTTTGGGACATATGGGTGAGAAAGGTATGGATATTCTTTGCAAGCGTGGTTTACTTGGTTCTATTACTAATTGTGATATTGACTTTTGCGAGCATTGTATCTATGGCAAGCAAAAGAGAGTAAGCTTCTCACCGGGTACACATAGAACCAAGGCAACTCTTGATTATGTCCACTCCGACTTGTGGGGTCCTTCACAAGTTGCCAATGGCGGAGGTAATTGCTATATGATGACTATTATTGATGATTACTCACGTAAGGTTTGGGTGTATTTCTTGAAGCATAAGAATAAGGCTCTAGACAAATTCAAGGAGTGGAAGACATTACTTGAGAATCAAACCGACATGAAACTCAAAAGGTTGAGGACCGATAATGGCCTCAAGTTTTGTGATCGAGAGTTCAAAGAATTTCACAAGAAGGAAGGTGTTGCTAGGCACCTCACAATTGTTGGCAAGCCACAACAAAATGGCGTTGCCGAAAGAATGAACTGTACAATCATGGAGAAGGTTCGTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127600.p1 GENE.R_Transcript_127600~~R_Transcript_127600.p1 ORF type:internal len:234 (+),score=34.80,rve|PF00665.22|2.5e-23,gag_pre-integrs|PF13976.2|2.7e-17 R_Transcript_127600:2-700(+)
TLESLGCHYSAQGGVLKVSKGSLVLMKGSRVGSLYVLQGSTITGSAAIASTSNTNEPKLWHMRLGHMGEKGMDILCKRGLLGSITNCDIDFCEHCIYGKQKRVSFSPGTHRTKATLDYVHSDLWGPSQVANGGGNCYMMTIIDDYSRKVWVYFLKHKNKALDKFKEWKTLLENQTDMKLKRLRTDNGLKFCDREFKEFHKKEGVARHLTIVGKPQQNGVAERMNCTIMEKVRC

Click here to download the sequence:
Link to NCBI Protein BLAST