Transcript Information: R_Transcript_127601.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72186851233351
Replicate 20.11862316619377
Replicate 31.1647493692959
Condition 2: 8 Hour
Replicate 10.69169110020467
Replicate 21.0106613261553
Replicate 30.10255147243156
Condition 3: 24 Hour
Replicate 11.037641004642
Replicate 20.12460598243264
Replicate 31.2365934851354


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127601.p1 GENE.R_Transcript_127601~~R_Transcript_127601.p1 ORF type:internal len:177 (+),score=27.03,rve|PF00665.22|1e-23,gag_pre-integrs|PF13976.2|2.1e-09 R_Transcript_127601:2-529(+)
AAACTTTGGCATATGCATTTGGGTCATATGGGTGAGAAAGGTATGGCTACTCCTTGTAAACGTGGTTTGCTTGGCTCACTTACTAATTGTGATATTGATTTTTGTGAGTATTGTGTTTATGGTAAGCAAAAGAAAGTAAACTTCTCACCAGGCATACATAGAAACAAGGCAAAACTTGATTATGTCCACTCCGACTTGTGGGGTCCTTCACAAGTTGCCAATGGCGGAGGTAATTGCTATATGATGACTATTATTGATGATTACTCACGTAAGGTTTGGGTGTATTTCTTGAAGCATAAGAATAAGGCTCTAGACAAATTCAAGGAGTGGAAGACATTACTTGAGAATCAAACCGACATGAAACTCAAAAGGTTGAGGACCGATAATGGCCTCAAGTTTTGTGATCGAGAGTTCAAAGAATTTCACAAGAAGGAAGGTGTTGCTAGGCACCTCACAATTGTTGGCAAGCCACAACAAAATGGCGTTGCCGAAAGAATGAACTGTACAATCATGGAGAAGGTTCGTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127601.p1 GENE.R_Transcript_127601~~R_Transcript_127601.p1 ORF type:internal len:177 (+),score=27.03,rve|PF00665.22|1e-23,gag_pre-integrs|PF13976.2|2.1e-09 R_Transcript_127601:2-529(+)
KLWHMHLGHMGEKGMATPCKRGLLGSLTNCDIDFCEYCVYGKQKKVNFSPGIHRNKAKLDYVHSDLWGPSQVANGGGNCYMMTIIDDYSRKVWVYFLKHKNKALDKFKEWKTLLENQTDMKLKRLRTDNGLKFCDREFKEFHKKEGVARHLTIVGKPQQNGVAERMNCTIMEKVRC

Click here to download the sequence:
Link to NCBI Protein BLAST