Transcript Information: R_Transcript_127665.p1


Annotated TAIR IDAT1G43580.1
Annotated Gene NameSphingomyelin synthetase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16410673-16412612 | Reverse length=421
E-Value1.5E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.223716914182
Replicate 212.731799188606
Replicate 312.854578810607
Condition 2: 8 Hour
Replicate 114.001225967175
Replicate 213.024024263882
Replicate 315.303352570911
Condition 3: 24 Hour
Replicate 116.607775441318
Replicate 215.192319288988
Replicate 315.71723474857


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127665.p1 GENE.R_Transcript_127665~~R_Transcript_127665.p1 ORF type:3prime_partial len:376 (+),score=61.51,PAP2_C|PF14360.2|5.6e+03,PAP2_C|PF14360.2|6.3e-17 R_Transcript_127665:136-1260(+)
ATGGGGTTGAAACTGGGTGGTGGTGGGCTAGGAATTGCTGCAATCTCATACATAGCCATAGACTATCTCAGAGAGATCTCACCCTTATGGCATTCTCGTCTTCAACCTGCTCTTTGGTCTATTCTTTGTCTAATTGCTCTTTCTCGTGTCCCCTTTTACAAGCACTGGGCTTCTGAGTTTCGTTATGCTCTTCCTTTTCTTGCTTCCATTGTTTTCCTCCTTTCTGCTCTTCTCTATGAGGCTCTCTCTGTTCGCTTTGTCACTGCTGTTCTTGGCCTTCATTGGCACCGGTTTTTCTGTACTCTTCGACTCTGTAAAAGCCCCTGGCCTTGGACTAGGAGCAAGGTACTTGTTCACAATGGCGATCGGGCGACTTTGCGTGCCATAACTTTTGTGTCAACAATTCTCCCATCAGCTCGGCCATGGTGTGCTGCTGCTCGCTTTAAAGTTCCTGCATATCCTCACCATTGGGCTCAGAAATATTACGTTCCGTATGCTTCAGATGCAAGTGCTATTCGTCAGTTGTTGAAACATGATCTTGCATTTGCTGATCCTGGTGAATTACTTGGTGATTACCGTCCTGACTGGGGTTCAATGAGCTTTCTAATTGATTTTCTGCGGCCTACTCCTTCCGAGGGATCAACGTGGTATCATCTGCTGAAGAAAGCTGGAGGTGGTTGCAATGATCTCCTGTACAGTGGCCACATGCTTGTCGCTGTACTGACGGCCATGGCTTGGATGGAAGCATATGGAGGATTTAGCTCAGCCCTTGTATGGCTGCTCGTGATGCACAGTGCACAGAGAGAAATCAGGGAGCACCATCATTATAGTGTGGACTGTATTGTGGCTATCTATGTTGGCATTCTCTTGTGGAAAATGACAGGCTTCATTTGGTCATCTAAGAACGTTTCTAGAATCAAAAGGCTCGCTAGACTAGAAACGATTCAAGGTAAGCTCGTCCAGGCTGCTAAAGATTCGGACATGGAACAAGTGCGGGAATTGCTGAGAGAAGTCGAGTTAGGCAGTCAGGATAAACAGGATGGTGGAGCGAGCAGCAAGTTTATGTGGTTGTTCCCTTTGGTAACTATAGTCTCCACCTTGACTATTGTTCTTTTGGCGTTCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127665.p1 GENE.R_Transcript_127665~~R_Transcript_127665.p1 ORF type:3prime_partial len:376 (+),score=61.51,PAP2_C|PF14360.2|5.6e+03,PAP2_C|PF14360.2|6.3e-17 R_Transcript_127665:136-1260(+)
MGLKLGGGGLGIAAISYIAIDYLREISPLWHSRLQPALWSILCLIALSRVPFYKHWASEFRYALPFLASIVFLLSALLYEALSVRFVTAVLGLHWHRFFCTLRLCKSPWPWTRSKVLVHNGDRATLRAITFVSTILPSARPWCAAARFKVPAYPHHWAQKYYVPYASDASAIRQLLKHDLAFADPGELLGDYRPDWGSMSFLIDFLRPTPSEGSTWYHLLKKAGGGCNDLLYSGHMLVAVLTAMAWMEAYGGFSSALVWLLVMHSAQREIREHHHYSVDCIVAIYVGILLWKMTGFIWSSKNVSRIKRLARLETIQGKLVQAAKDSDMEQVRELLREVELGSQDKQDGGASSKFMWLFPLVTIVSTLTIVLLAFN

Click here to download the sequence:
Link to NCBI Protein BLAST