Transcript Information: R_Transcript_127814.p1


Annotated TAIR IDAT3G49710.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18437845-18440010 | Forward length=721
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2422153983072
Replicate 20.52490751040745
Replicate 30.89081757318371
Condition 2: 8 Hour
Replicate 11.3943339761626
Replicate 20.7764195083745
Replicate 31.4117919371412
Condition 3: 24 Hour
Replicate 11.2116620481288
Replicate 21.2559244646023
Replicate 32.0367725194752


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127814.p1 GENE.R_Transcript_127814~~R_Transcript_127814.p1 ORF type:complete len:720 (+),score=162.32,PPR_2|PF13041.2|5.1e-05,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|0.0069,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|5.4e+03,PPR_2|PF13041.2|1.3e+03,PPR|PF01535.16|0.0058,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|0.00028,PPR|PF01535.16|9.9e-08,PPR|PF01535.16|6.3e+02,PPR|PF01535.16|0.15,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.00027,PPR|PF01535.16|9.9e-05,PPR|PF01535.16|0.074,PPR|PF01535.16|0.00083,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|1.4e+02,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|4.3e-05,PPR_1|PF12854.3|60,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.057,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.0012,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|1.7e+02,DYW_deaminase|PF14432.2|1.7e-36,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|4.7e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3.4e+03,TPR_14|PF13428.2|0.24 R_Transcript_127814:266-2425(+)
ATGAACCCCATTTCATGGACCCTTTATGGATTTTGCCAACTTCTAAAAACATGCATTTCAAAAACCGATCCTCTAACAGGAAAATCCCTTCACACTCTTTACTTAAAGTCTATCATACCCCCTTCCACTTACCTTTCCAACCACTTTATCCTTCTCTACTCCAAATGCCGCCATCTTGCTGCTGCTCGCAACACATTCACCTTTACTCCATGCCCAAATGTCTTCTCCTACAATGCCCTCCTATCTGCTTATGTTAGAGACTCTGATATCCGCATTGCGCACCAACTGTTTGACGAAATTCCTCAACCAGATATTGTGTCTTTTAATACCCTTATTGCTGCTTATGCGGAGCGAGGCCAGAAATGGATGGCTTTTGATATTTTTGATAAGATGAGACACATGGGGGGTATTGAGATGGATGGGTTCACTTTGTCTTCAATGGTCTCTGCGTGTTGTGATAACGTTTTGCTCATAAATCAACTACATTGTGTGGGTGTTAAGGGAGGGCATGATGGGTATGTTTCATTTAATAATGCCCTTGTTAGTTACTATAGTAAAAATGGGTTTTTGGAGGAGGCAAAGAGGGTGTTTTCTGAGATGAGTGGGAAGCAAGATGAGGTGTCTTGGAATGCTATGATTGTTGTCTATGGACAACATGGTGAAGGGTCAAAAGCCCTTGAGTTGTATACGGAAATGGTTAAGAGGGGTTTGTATGTTGACATGTATACATTGGCTAGTGTTTTGAGTGCATTTACGAGCTTGAAAAACTTGTTTGGTGGGGTTCAGTTTCATGCTCATTTGATCAAGATAGGCTTTCATAAGAATCCCCATGTGGGAAGTGGATTGATTGATTTGTATGCTAAATGTGGGGGTGACATGTATGAATCTAGGAAAGTTTTTGAGGAAATTCCTGAACCTGATTTAGTTTTATGGAATACCATGATCTCTGGTTATTCACAATATGAGGCATTATCTGAAGATGCTCTTGTTTGTTTCAAGGATATGTTGCGTATGGGTCATCACCCTGATGATTGCAGCTTCGTTTGTGTGATTAATGCTTGTTCAAATTCACCCTCTCCTTCACATGGAAAACAGATTCATTCTTTGGCCTTGAAGTCTGATATTCCATCGAATAGGATAGCTGTGAACAATGCCCTGGTAGCAATGTATGCAAAATGTGGAAATCTTCAAGAAGCAAGACATTTATTTGATAGGATGCCTGAGCATAATGTTGTTTCTCTGAACACCATGATTGATGGTTATTCACAACATGGGTTTGGACATGGAGCATTGGATATTTTTGAATGGATGCTGGAAATTGGTATCACTCCTACCAATATCACCTTCATCTCTGTACTTTCTGCATGTGCACACACAGGGAAAGTTGATGAAGGCCAGAATTATTTTGATATGATGGGAGGGAGATTTGGGATTGATCCTGAGCCAGAACATTATTCCTGCATGATCGACATGTTCGGCCGAGCTGGGAAGTTGCATGAAGCTGAGCAACTAATTGCGTCTATGCCGTGTAGTCCTGGTTCTATTGGTTGGGCAGCTTTGCTTGGTGCCTCCAGAAAACATGGCAATATTGACTTAGCTGTGAAGGCAGCTAATCGATTTCTTCAGTTGGAACCATCAAATCCTGGTCCTTATGTCATGCTTGCCAACATGTATGCTGATGCTGAAAGATGGGAAGATGTTGCAAGAGTGAGGAAACTGATGCGAGATAGGAAGCTTAGGAAGAAACCAGGCTGCAGCTGGATTGAAGTAGACAAGAAGGTTCACATTTTTGTTGCTGGTGATGCTTCGCACCCTATGATAAAGGAGATATATGAATACTTGAAGGAACTATTAGTGAAGATAAAGCGGGTTGGCTATGTGCCTGACATGAGATGGGCATTGGTCAAGGATGATGGGCTAGCAGAAGCAGAGAAAGAGAAGATTTTGGTTCATCACAGTGAGAAGCTTGCAGTTGCATTTGGGCTTCTTTCAACCCAAGAGGGACCTATCCTTGTTGGCAAGAATCTGAGAATATGTGGAGATTGTCATAGTGCCATCAAGTTTATTTCTGCTGTCACTGGAAGGCAGATAACCATCAGAGATACCCGCAGGTTTCATTGCTTCAAGGATGGACGATGCACTTGTGGGGATTACTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127814.p1 GENE.R_Transcript_127814~~R_Transcript_127814.p1 ORF type:complete len:720 (+),score=162.32,PPR_2|PF13041.2|5.1e-05,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|0.0069,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|5.4e+03,PPR_2|PF13041.2|1.3e+03,PPR|PF01535.16|0.0058,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|0.00028,PPR|PF01535.16|9.9e-08,PPR|PF01535.16|6.3e+02,PPR|PF01535.16|0.15,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.00027,PPR|PF01535.16|9.9e-05,PPR|PF01535.16|0.074,PPR|PF01535.16|0.00083,PPR|PF01535.16|3.7e+03,PPR|PF01535.16|1.4e+02,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|4.3e-05,PPR_1|PF12854.3|60,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.057,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.0012,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|3.6e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|0.0092,PPR_3|PF13812.2|11,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|1.7e+02,DYW_deaminase|PF14432.2|1.7e-36,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|2.4e+02,TPR_14|PF13428.2|2.8e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|4.7e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|3.4e+03,TPR_14|PF13428.2|0.24 R_Transcript_127814:266-2425(+)
MNPISWTLYGFCQLLKTCISKTDPLTGKSLHTLYLKSIIPPSTYLSNHFILLYSKCRHLAAARNTFTFTPCPNVFSYNALLSAYVRDSDIRIAHQLFDEIPQPDIVSFNTLIAAYAERGQKWMAFDIFDKMRHMGGIEMDGFTLSSMVSACCDNVLLINQLHCVGVKGGHDGYVSFNNALVSYYSKNGFLEEAKRVFSEMSGKQDEVSWNAMIVVYGQHGEGSKALELYTEMVKRGLYVDMYTLASVLSAFTSLKNLFGGVQFHAHLIKIGFHKNPHVGSGLIDLYAKCGGDMYESRKVFEEIPEPDLVLWNTMISGYSQYEALSEDALVCFKDMLRMGHHPDDCSFVCVINACSNSPSPSHGKQIHSLALKSDIPSNRIAVNNALVAMYAKCGNLQEARHLFDRMPEHNVVSLNTMIDGYSQHGFGHGALDIFEWMLEIGITPTNITFISVLSACAHTGKVDEGQNYFDMMGGRFGIDPEPEHYSCMIDMFGRAGKLHEAEQLIASMPCSPGSIGWAALLGASRKHGNIDLAVKAANRFLQLEPSNPGPYVMLANMYADAERWEDVARVRKLMRDRKLRKKPGCSWIEVDKKVHIFVAGDASHPMIKEIYEYLKELLVKIKRVGYVPDMRWALVKDDGLAEAEKEKILVHHSEKLAVAFGLLSTQEGPILVGKNLRICGDCHSAIKFISAVTGRQITIRDTRRFHCFKDGRCTCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST