Transcript Information: R_Transcript_127847.p2


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeHomolog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86918861689137
Replicate 20.66654921956502
Replicate 30.72719801892547
Condition 2: 8 Hour
Replicate 10.58299678445822
Replicate 20
Replicate 30.86436241049462
Condition 3: 24 Hour
Replicate 11.093228915605
Replicate 20
Replicate 31.2159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127847.p2 GENE.R_Transcript_127847~~R_Transcript_127847.p2 ORF type:complete len:126 (+),score=10.15,Hist_deacetyl|PF00850.15|7e-21 R_Transcript_127847:778-1155(+)
ATGTTGAAACATAAAGATGTCGATCGTCACGCAGAGTGCCCGGATAGATTACGGGCTATTTGGAAAAGGCTGGTCCAAGATAAGCTTACACAGAGGTGTAGGCTCTTTGATTGCAAGGCGGTGGATGACCAAGACCTCCACCGCGTGCACTCGTCGGCCTATACTTCACTTGTTAGGTCGACGAAGGATATGACTGCTGTGGAGAGGAAACAGATTGCGAATAGGTATCATAGTGTGTACCTTCATCGCACATCAGCAGAGGCAGCCTCCGTAGCTGCTGGAGGTGCCGTATTGGCTGCCGATCAAGTAGCGGAGAAAAAACTCGACTCAGCATTTGCAATAGTTAGACCCCCTGGTCACCATGCTAGTCGAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127847.p2 GENE.R_Transcript_127847~~R_Transcript_127847.p2 ORF type:complete len:126 (+),score=10.15,Hist_deacetyl|PF00850.15|7e-21 R_Transcript_127847:778-1155(+)
MLKHKDVDRHAECPDRLRAIWKRLVQDKLTQRCRLFDCKAVDDQDLHRVHSSAYTSLVRSTKDMTAVERKQIANRYHSVYLHRTSAEAASVAAGGAVLAADQVAEKKLDSAFAIVRPPGHHASRS*

Click here to download the sequence:
Link to NCBI Protein BLAST