Transcript Information: R_Transcript_127851.p1


Annotated TAIR IDAT1G54690.1
Annotated Gene Namegamma histone variant H2AX
Annotated Gene Symbol(s)HTA3, H2AXB, G-H2AX, GAMMA-H2AX
Annotation TypeHomolog
Chromosome Positionchr1:20414607-20415206 | Reverse length=142
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1934628316547
Replicate 20.32302000640459
Replicate 31.4977482274407
Condition 2: 8 Hour
Replicate 10.94176403643251
Replicate 20.86003391696868
Replicate 31.1868360790253
Condition 3: 24 Hour
Replicate 11.7659851713618
Replicate 20.84827918809913
Replicate 31.1785687139099


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127851.p1 GENE.R_Transcript_127851~~R_Transcript_127851.p1 ORF type:complete len:260 (+),score=51.59,Histone|PF00125.20|2.8e-10 R_Transcript_127851:1514-2293(+)
ATGCTGCTTCAGGGATTTAATTGTGGCATAGTTCTTGTCCTTGAAGGAGGCTACGAGTTAGAAGGGCTGCCCCATTGTGTTTCCGCTTGTGTAAAGACACTATTAGGTGAAGCAGTGAAAGATGTTAACACAAAACGAAGGATGGAAGTCCGAAATCAAATTTATAAGGTGCAAGGTCACTTCTGTGCTCACTTCCCACACGTGTGGAAATCTCTTCTCAAGAAAAGACGGGAGAGAGTAGAGAGCGTAGCAGCTCAACCTTCACTTGTCCTTTCTATAGAGAGAGCTGAAAAAGGTGGAGTTGAGGCACATGATGTTGCCACCGCTAGTCAGCGTTCTGAGTTTCCTTCAATCTCAATCTCAAATGAAAAGGCACAAGATGATGTCATCACTAGTTCCAACTCTCAGGCACGGACAAGAAATGGGACGATTACTTTAAAAAAGAAGCCAAAGACTGTGATGTCTCGGTCAAAGAAGGCAGGGCTTATTTTCCCTTTGGGGCGTATTGAGCGCTCTTTAAAGGAGGGTAAATACGCCCACTGGGTTGGTATTACAGCATCAGTTTACTTAGCTGGTGTTCTTGAGTATCTTGTTATGGAGGTGCTTGAGCTTGCTGGAAAGGAAGCAAAGGCCAACAAAAAGGTTAGGATACGTCCTAGATATATCCAGCTGAAGCTGAAGGACGATTCAGAGTTCTCACAATTGTGTGCTGGAGTGATAATACATGAAGGTGGTTTCATTCCTGATAGCACACTGCAACAGCTGAGTTGCTTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127851.p1 GENE.R_Transcript_127851~~R_Transcript_127851.p1 ORF type:complete len:260 (+),score=51.59,Histone|PF00125.20|2.8e-10 R_Transcript_127851:1514-2293(+)
MLLQGFNCGIVLVLEGGYELEGLPHCVSACVKTLLGEAVKDVNTKRRMEVRNQIYKVQGHFCAHFPHVWKSLLKKRRERVESVAAQPSLVLSIERAEKGGVEAHDVATASQRSEFPSISISNEKAQDDVITSSNSQARTRNGTITLKKKPKTVMSRSKKAGLIFPLGRIERSLKEGKYAHWVGITASVYLAGVLEYLVMEVLELAGKEAKANKKVRIRPRYIQLKLKDDSEFSQLCAGVIIHEGGFIPDSTLQQLSCLR*

Click here to download the sequence:
Link to NCBI Protein BLAST