Transcript Information: R_Transcript_127852.p2


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeHomolog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47205933503583
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.38553244553768
Replicate 30.15647940189989
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127852.p2 GENE.R_Transcript_127852~~R_Transcript_127852.p2 ORF type:complete len:116 (+),score=6.79,Hist_deacetyl|PF00850.15|2.5e-12 R_Transcript_127852:396-743(+)
ATGTTGAAACATAAAGATGTCGATCGTCACGCAGAGTGCCCGGATAGATTACGGGCTATTTGGAAAAGGCTGGTCCAAGATAAGCTTACACAGAGGTGTAGGCTCTTTGATTGCAAGGCGGTGGATGACCAAGACCTCCACCGCGTGCACTCGTCGGCCTATACTTCACTTGTTAGGTCGACGAAGGATATGACTGCTGTGGAGAGGAAACAGATTGCGAATAGGTATCATAGTGTGTACCTTCATCGCACATCAGCAGAGGCAGCCTCCGTAGCTGCTGGAGGTGCCGTATTGGCTGCCGATCAAGTAGCGGAGAAAAAAACTCGACTCAGCATTTGCAATAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127852.p2 GENE.R_Transcript_127852~~R_Transcript_127852.p2 ORF type:complete len:116 (+),score=6.79,Hist_deacetyl|PF00850.15|2.5e-12 R_Transcript_127852:396-743(+)
MLKHKDVDRHAECPDRLRAIWKRLVQDKLTQRCRLFDCKAVDDQDLHRVHSSAYTSLVRSTKDMTAVERKQIANRYHSVYLHRTSAEAASVAAGGAVLAADQVAEKKTRLSICNS*

Click here to download the sequence:
Link to NCBI Protein BLAST