Transcript Information: R_Transcript_127878.p1


Annotated TAIR IDAT1G12790.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4359597-4361222 | Reverse length=250
E-Value2.2E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0317785241347
Replicate 22.5296747489516
Replicate 32.8518428332559
Condition 2: 8 Hour
Replicate 12.7534305964774
Replicate 22.4246739345864
Replicate 33.2075135232812
Condition 3: 24 Hour
Replicate 13.4114010739962
Replicate 22.4801094334786
Replicate 33.1644874246117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_127878.p1 GENE.R_Transcript_127878~~R_Transcript_127878.p1 ORF type:complete len:249 (+),score=39.06 R_Transcript_127878:133-879(+)
ATGGGGGATATGAGAGCTCAAGCCCCTTCTATGCCGTTGGACTCTACCCTAAACACAGTTAATGGTCATGGTGGAGTTTGTATGATGAGTAACAAGTGGAAAGAGGAGCAGCACCCATCCTTCATCAACTTCATCTCCACGTTCCTCACCGCTAACTCTTTCCGTCTAAATATAGTCCCTGTTGCGCCTGATTTCATTTTCAACTGTGGAGGTGTATCAGTTGCATTCATATTTGTGACCAGCTGGGATTCCACCACTAGTGCGCCCCTCTTGTATAGCAGGGTACTCAAGCTAAAGGAGCAGTTTGCACACCTTTACGTTGTTGTCACCCTCCCAACCAGAGATCAAAATGAGTCCTTTGTTCGCTCTTATTTCAAAAGCGGAGTTGATATTGGAAGGCCCACGTTTGTGCCAGTTTTAGACTTGGAGATGGGCTTTGAAAAAATTGTCAAGATTGCTCATGCCCGTGGTGTGTGCAAGCGACTTGACATTGTAGCAAGGATGAAGGCCGAGAGGAAACAAGCTGTGCAAGCGATGGACGCTTTTCTCAGGGTGATTACATCCATACCCAGTATAGACAATCATGATGCAAATTCGCTCATTCAAGCTATTGGGTCGATTGAAGCAATCGCCAAGGCATCAAAGGACTATGTTTTAGAGAACACAGACCTTTCAGCTGAGAAGGCAGAGATGATTGCAAGGTTCTTCAGGGACCCAAAGTTCTACCTGAGTCCAAAAATTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_127878.p1 GENE.R_Transcript_127878~~R_Transcript_127878.p1 ORF type:complete len:249 (+),score=39.06 R_Transcript_127878:133-879(+)
MGDMRAQAPSMPLDSTLNTVNGHGGVCMMSNKWKEEQHPSFINFISTFLTANSFRLNIVPVAPDFIFNCGGVSVAFIFVTSWDSTTSAPLLYSRVLKLKEQFAHLYVVVTLPTRDQNESFVRSYFKSGVDIGRPTFVPVLDLEMGFEKIVKIAHARGVCKRLDIVARMKAERKQAVQAMDAFLRVITSIPSIDNHDANSLIQAIGSIEAIAKASKDYVLENTDLSAEKAEMIARFFRDPKFYLSPKIG*

Click here to download the sequence:
Link to NCBI Protein BLAST