Transcript Information: R_Transcript_12788.p1


Annotated TAIR IDAT5G01950.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:365040-369532 | Reverse length=951
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.095771754227
Replicate 29.2748488067757
Replicate 310.798197277847
Condition 2: 8 Hour
Replicate 115.225850343255
Replicate 219.376272612383
Replicate 323.112538099264
Condition 3: 24 Hour
Replicate 115.443016514398
Replicate 213.083628155427
Replicate 316.346220131634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12788.p1 GENE.R_Transcript_12788~~R_Transcript_12788.p1 ORF type:complete len:944 (+),score=149.80,Pkinase|PF00069.21|7.9e-48,Pkinase_Tyr|PF07714.13|9e-47,LRR_8|PF13855.2|0.0018,LRR_8|PF13855.2|5.5e-06,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|6.2e-06,LRR_8|PF13855.2|4.3e+02,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|13,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|0.67,LRR_4|PF12799.3|0.00067,LRR_4|PF12799.3|4.1e+03,LRRNT_2|PF08263.8|7.5e-08,LRRNT_2|PF08263.8|5.3e+03 R_Transcript_12788:357-3188(+)
ATGGTTGGGTATAGAGCTTTACTCTTGGTATGGTACCTATGCTTCTGCCTCAAACTTCAAGATGTTGTTGCACAAAATACCCATCCTGCTGAAGTCTCAGCATTACACGCAGTCAGGAGGAGACTTATTGATCCAAAGAGGCACTTGGCAAGCTGGAAAAGTGGAGATCCATGTACAGATAATTGGAATGGTGTTTTTTGCAATGACACAGTTGGTGCTGATGGATATTTCCATGTTGAAGCCGTCCAACTTATGTACAAGAATCTCTCAGGAACTTTAGCACCTGAGATTGGGCAAATGTCTCATCTGAAGCTACTAGACTTCATGTGGAATAAAATATCTGGTGACATCCCAAAGGAGATTGGGAATCTTGCATCTTTGGAAATACTGGTTTTAAATGGGAACAAATTGTCAGGTGCTATGCCTGATGAACTGGGCTTGCTCTCAAAACTGCTTAGACTTCAACTGGACGAGAATTATTTATCTGGAACCATACCCAAGTCCTTTGCCAACATGATCAAGATTGAACATTTCCATTTGAACAATAACTCCCTCAGTGGGCAGCTTCCTCCTGAGCTTTCTCAGTTACCCAATCTTGTGCACCTGCTGGCGGATAACAACAACTTATCTGGAGTTCTTCCTCCTGAGTATTCAACTTTACCAAAATTGGAAATACTCCAGCTCGACAATAATCATTTTGTTGGTTCCGAAATTCCAAAATCCTATCAAAATTTCTCCAGATTGGTGAAGTTAAGTCTCCGAAATTCTAGCTTGGGGGGAGCAGTTCCTGATTTTAGCAAGATTGTAAATTTTAGTTATATAGATCTGAGTTGGAATGAGTTGACAGGGACAATTCCTTCAAACAAGCTGTCAGATAAGATGATAACAATTGACTTATCCAACAACAGGCTGAGTGGATCAATTCCTGAAAGTTTCTCTAATCTTACATCTCTACAGATGTTGTCACTTGAAAACAATACATTGAATGGTTCTATCCCTGCTAGCATTTGGCAGGACAAATTCTTTAATGCTACTGCTAGACTCTCAGTTGATCTTCGATACAATTTGTTTTCTGACATTTCTGGGGATCTTAATCCTCCCAAAAATGTGACCCTCAGGCTTCGAGGCAATCCTGTCTGTGACCGTGCCAACATAGAGAATGTACGCCATTTCTGTAATTCAGATGCAGGGGCAAATGGGACATTTGAAGGCTTGACAAATCCAACAGCAACTGATTGTCCTAGACGTATATGTCCTGTGTCAGATTATTACGAATATGTTCCTGCGGCTCCAGAATGCTTTTGTGCTGCTCCTATCGGAATAGGATATAGACTGAAGAGTCCTAGTTTTGTTTATTTCCCTCCATACAAATTTGCTTTCGAATCTTACATCACTCACTCGTCAAATATGGATCTATATCAACTCGTCATTGACTCATATGCCTGGGAAGAAGGACCTCGTCTACGGATGTATTTGAAAATCTTTCCAGATATCAATGGTAATAATTCTTTCAATGATACTCAGCTTCGCCGGATTCTACGTAAATACGCAACATGGGATTTTCCTGGTAGTGAGCTTTTTGGACCATATGAACTTCTGAACTTCACTCTTCAGGGACCTTATAGCTCCGTGGATCTCGATACTGGTAACAGTGGCATAGGCAAGGGTCTTTTGGCTGGCATTTTGGTAGCTGCAGTTATTTGTGCTGTTACTGTATCTGTGGCAGTCACATTTCTCATCATGAGAAGGAAAAGAAGATTCCAGCAAATGTCAAAAAAGAACTTATCCTCAATAATATCAGGAAAAATTGAAGGTGTCAAAGAGTTCACCTTCAAAGAATTATCACAAGCCACCGACAATTTTAGTAGCTCAACTAAAGTTGGTCAAGGAGGATATGGGAAGGTCTATAGGGGTGCTTTAGCTGATAAGGTTATAGTGGCTATTAAGCGTGCAGAGGAAGGGTCGCTGCAGGGATCACGTGAATTTCTAACAGAGATACAGCTTTTGTCAAGGTTACATCATCGGAACTTGGTCTCACTGCTTGGATATTGTGGTGAGAATGTTGAACAGATGCTTGTCTACGAATATATGCCAAATGGTACTTTACGGGACTGGCTTTCTGGTAAATCAAATAGGTCTCTGAACTTCGTCATGAGGTTACGCATCGCATTAGGTGCAGCCAAGGGCATCCTTTACCTGCATACTGAAGCAAACCCACCAATATTTCATCGTGATATTAAAGCTAGTAACATACTTCTGGATTCCAATCTTGTTGCAAAGGTTGCTGATTTTGGATTGTCACGTCTTGCTCCAGTAGAGGACGATGAAGGGAACTTACCACATCACGTGTCCACGGTTGTGAAGGGAACACCAGGATACCTTGACCCTGAATACTTCTTGACTCATAAGCTGACAGACAAAAGTGATGTATACAGTTTAGGAGTTGTGTTTCTAGAGCTTCTCACCGGTGTACCCCCAATATCACATGGGAAAAATCTAGTCCGTGAGGTACATGCGGCTTATCAATCAGGGTCACTGTTCGGCATTATAGACGACAAAATGGGTGCTTACCCATCAGAATGTTTAGAGAGATTCATTGCTTTGGCAGTGAGATGCTGTCAGGATAAACCAGAGATGAGACCTTCTATGTTAGATGTGGTAAGGGAGCTGGAGAACATGCTCCAAATGCTTCCTGATAGCATGAACATGTCTGACACGACATCTGTGTCATCGACATCTTTAAACAATGTCTCCAAGTATGCGCGTATGTCATCTGATGTGTCTGGAAGTGATTTAAACACTACTGTCATTCCCACCATTACACCACGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12788.p1 GENE.R_Transcript_12788~~R_Transcript_12788.p1 ORF type:complete len:944 (+),score=149.80,Pkinase|PF00069.21|7.9e-48,Pkinase_Tyr|PF07714.13|9e-47,LRR_8|PF13855.2|0.0018,LRR_8|PF13855.2|5.5e-06,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|6.2e-06,LRR_8|PF13855.2|4.3e+02,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|13,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|0.67,LRR_4|PF12799.3|0.00067,LRR_4|PF12799.3|4.1e+03,LRRNT_2|PF08263.8|7.5e-08,LRRNT_2|PF08263.8|5.3e+03 R_Transcript_12788:357-3188(+)
MVGYRALLLVWYLCFCLKLQDVVAQNTHPAEVSALHAVRRRLIDPKRHLASWKSGDPCTDNWNGVFCNDTVGADGYFHVEAVQLMYKNLSGTLAPEIGQMSHLKLLDFMWNKISGDIPKEIGNLASLEILVLNGNKLSGAMPDELGLLSKLLRLQLDENYLSGTIPKSFANMIKIEHFHLNNNSLSGQLPPELSQLPNLVHLLADNNNLSGVLPPEYSTLPKLEILQLDNNHFVGSEIPKSYQNFSRLVKLSLRNSSLGGAVPDFSKIVNFSYIDLSWNELTGTIPSNKLSDKMITIDLSNNRLSGSIPESFSNLTSLQMLSLENNTLNGSIPASIWQDKFFNATARLSVDLRYNLFSDISGDLNPPKNVTLRLRGNPVCDRANIENVRHFCNSDAGANGTFEGLTNPTATDCPRRICPVSDYYEYVPAAPECFCAAPIGIGYRLKSPSFVYFPPYKFAFESYITHSSNMDLYQLVIDSYAWEEGPRLRMYLKIFPDINGNNSFNDTQLRRILRKYATWDFPGSELFGPYELLNFTLQGPYSSVDLDTGNSGIGKGLLAGILVAAVICAVTVSVAVTFLIMRRKRRFQQMSKKNLSSIISGKIEGVKEFTFKELSQATDNFSSSTKVGQGGYGKVYRGALADKVIVAIKRAEEGSLQGSREFLTEIQLLSRLHHRNLVSLLGYCGENVEQMLVYEYMPNGTLRDWLSGKSNRSLNFVMRLRIALGAAKGILYLHTEANPPIFHRDIKASNILLDSNLVAKVADFGLSRLAPVEDDEGNLPHHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGVPPISHGKNLVREVHAAYQSGSLFGIIDDKMGAYPSECLERFIALAVRCCQDKPEMRPSMLDVVRELENMLQMLPDSMNMSDTTSVSSTSLNNVSKYARMSSDVSGSDLNTTVIPTITPR*

Click here to download the sequence:
Link to NCBI Protein BLAST