Transcript Information: R_Transcript_128286.p1


Annotated TAIR IDAT3G46610.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17160224-17162221 | Reverse length=665
E-Value7.8E-276
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1523219476116
Replicate 21.4036523955185
Replicate 31.8823085211323
Condition 2: 8 Hour
Replicate 15.0813285196929
Replicate 24.8894964471673
Replicate 36.244356299771
Condition 3: 24 Hour
Replicate 12.6219222739161
Replicate 21.8123402152424
Replicate 33.3532695202768


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128286.p1 GENE.R_Transcript_128286~~R_Transcript_128286.p1 ORF type:complete len:718 (+),score=149.95,PPR_2|PF13041.2|5.8,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|9.4e-13,PPR_2|PF13041.2|38,PPR_2|PF13041.2|0.00029,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.0014,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|25,PPR|PF01535.16|0.073,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|4.8,PPR|PF01535.16|0.47,PPR|PF01535.16|0.0081,PPR|PF01535.16|0.0029,PPR|PF01535.16|23,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|0.16,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.0073,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.09,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|9.6e+02,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.42,PPR_1|PF12854.3|12,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.0046 R_Transcript_128286:270-2423(+)
ATGCAAGCATTAAGCATCTGGTCTCCAAAATGGGACACTTTGGAAGTACCCCATTTGGACCTTCACCTTGGTTCTGCGTCTCTTGGGCGTGAGATAAACAAAAGGAGAAAAAGATTGGATGTTTCTGACTCTATTGTTAGCCTTAGGAGGCCTGGTATTTTGTTTGCTTCGAGATGCTTAACAATATCCAAAACTCGAGCTATTTGTAGGAGCTCAAGGTTTGATTTGGGATGTGGGTGTTTTTCAGGATTTTCCGATGCTAAAGTTGTTCTTTATAACAACCCTAGAACTTCTGTTGGCATGTGTTTTGAGTTGGGTTGGGCTTTACAAGAGCATGCAGTGAGTGAGAATAATACTGAAGAGAATTCACAGCAAAATGATATGCATTTGGATGAGAATGGAACTACTGAAGATGGTGAAGTAGAAACTAGGGAAAAAGAGAATAAGGAACGGATTAATGTTCGTGCACTTGCCCAAAGTTTAGTGCTCGCTGAATCAGTAGAGGATGTAGAAGAGCTTCTCAAGGACAAGGTTGAGGTGCCTCTCCAAGTGTTTTCGTCTATCATTAGAGGGTTTGGCCGAGAGAAGAAACTAGAGCCTGCGATACTTGTTGTTGACTGGCTTAAGAGGAAGAATGAGGAGAATGGTGAGTTTGAAGGCCCGAATCTTTTCATTTATAATAGCCTCTTAGGTGCTGTTAAACAGTCTGGGGAATTTGATAAAGTCGAAATGGTCATGAATGAGATTGTGCAAGCTGGGATTTCTCCTAATGTCGTGACTTATAACACTTTGATGGGTATCTATTTGGATCAAGGCAGAGCGGCTGAGGCTCTCAGTATTTTTGAGGATATCCAAAGTAAGGGTCTATCTCCGTCTCCAGCTTCCTATTCTACGGCCTTGTTATCTTACCGAAAGTTGGAAGATGGGTTCGGAGCGTTGAACTTGTTTCTCTCTTTGAGAGAGAAGTATTGTAACGGGGAGCTAAAACAGAACTATGATGGTGAAGATTGGGAAGCTGAGTTTGACAAGTTCAAGAACTTTATGAGTCGTGTGTGCTACCAAGTGATGCGACGATGGCTTGTGAAAGAAGGGAACTACAGCACCAATGTATTGAAATTATTGATAGAAATGGATAAGGCTGATCTTCCACCCACTCGTGAGGAGTATGAGCGCCTTGTTTGGGCTTGTACTCGTGAGGAGCACTGTTCTGTTGCCAAAGAATTGTACACTAGGATTAGGGAACGACAACCAGATATCAGTTTGTCTGTTTGTAATCATATCATCTGGTTGATGGGCAAGGCCAAGAAATGGTGGGCTGCTTTGGAGATTTATGAAGATTTGTTAGATAAGGGGCCTAAGCCAAACAATTTGTCATATGAGCTGATTATATCTCACTTTAATGTTTTGTTAAGTGCTGCTAGGAAAAGAGGAATTTGGAGATGGGGGGTAAGGTTGCTGAACAAGATGGAAGAGAAAGGTTTTAAACCAGGAAGCAGGGAGTGGAATGCTGTTCTTGTAGCCTGTTCCAAGGCTTCGGAAACTACTGCTGCCGTAGAAATCTTCAGCAGAATGATTGAGAGAGGTGAGAAGCCAACCATAGTTTCATACGGAGCATTGCTCAGTGCTCTCGAGAAAGGAAAACTATATGATGAAGCTGTTCGGGTGTGGGAACATATGCTCAAAGTTGGTGTTGAACCCAATGTGTATGCATACACCATTATGGCCTCGGTTTATGCCGGACTCGAGAAGTTCCATGTTGTTGACTACCTCATTAAAGAGATGGTTTCAACAGGAAACGATCCAACAGTCGTCACTTTCAATGCAATCATCAGCGTATGTTCAAGAAATGGCTTGGGTGGTGCTGCATATGAGTGGTTTCAGCACATGAAAACAATGAACATCGAACCAAATGAGATCACTTACGAAATCTTGATCGAGGCTCTCGCAAAAGATGGAAAGCCGAGACTAGCATATGATATCTATTTGAGGGCAGTGAATGAGGGCCTAAACCCCTCTGCGCAGGCTTATGATGCTGTCATTCAATCATCAGAGACGTTGGGTGCGACTATCGATGTAAATGCACTAGGACCTAGGCCACCTGAGAAATCAAAGAAGATCGTGACTGACTCTAACCTAGCTGATGATCCTAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128286.p1 GENE.R_Transcript_128286~~R_Transcript_128286.p1 ORF type:complete len:718 (+),score=149.95,PPR_2|PF13041.2|5.8,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|9.4e-13,PPR_2|PF13041.2|38,PPR_2|PF13041.2|0.00029,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|1.4e-13,PPR_2|PF13041.2|0.0014,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|25,PPR|PF01535.16|0.073,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|1.5e+04,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|4.8,PPR|PF01535.16|0.47,PPR|PF01535.16|0.0081,PPR|PF01535.16|0.0029,PPR|PF01535.16|23,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|0.16,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.0073,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.09,PPR_3|PF13812.2|0.49,PPR_3|PF13812.2|9.6e+02,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.42,PPR_1|PF12854.3|12,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|0.0046 R_Transcript_128286:270-2423(+)
MQALSIWSPKWDTLEVPHLDLHLGSASLGREINKRRKRLDVSDSIVSLRRPGILFASRCLTISKTRAICRSSRFDLGCGCFSGFSDAKVVLYNNPRTSVGMCFELGWALQEHAVSENNTEENSQQNDMHLDENGTTEDGEVETREKENKERINVRALAQSLVLAESVEDVEELLKDKVEVPLQVFSSIIRGFGREKKLEPAILVVDWLKRKNEENGEFEGPNLFIYNSLLGAVKQSGEFDKVEMVMNEIVQAGISPNVVTYNTLMGIYLDQGRAAEALSIFEDIQSKGLSPSPASYSTALLSYRKLEDGFGALNLFLSLREKYCNGELKQNYDGEDWEAEFDKFKNFMSRVCYQVMRRWLVKEGNYSTNVLKLLIEMDKADLPPTREEYERLVWACTREEHCSVAKELYTRIRERQPDISLSVCNHIIWLMGKAKKWWAALEIYEDLLDKGPKPNNLSYELIISHFNVLLSAARKRGIWRWGVRLLNKMEEKGFKPGSREWNAVLVACSKASETTAAVEIFSRMIERGEKPTIVSYGALLSALEKGKLYDEAVRVWEHMLKVGVEPNVYAYTIMASVYAGLEKFHVVDYLIKEMVSTGNDPTVVTFNAIISVCSRNGLGGAAYEWFQHMKTMNIEPNEITYEILIEALAKDGKPRLAYDIYLRAVNEGLNPSAQAYDAVIQSSETLGATIDVNALGPRPPEKSKKIVTDSNLADDPR*

Click here to download the sequence:
Link to NCBI Protein BLAST