Transcript Information: R_Transcript_128329.p1


Annotated TAIR IDAT3G27960.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10380513-10382593 | Reverse length=663
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0689198718136
Replicate 25.6338620757425
Replicate 36.8435066677302
Condition 2: 8 Hour
Replicate 11.9642879210791
Replicate 22.5670168642025
Replicate 33.6403645089296
Condition 3: 24 Hour
Replicate 14.7630305451668
Replicate 24.6367902508544
Replicate 34.5712910203617


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128329.p1 GENE.R_Transcript_128329~~R_Transcript_128329.p1 ORF type:complete len:723 (+),score=155.42,TPR_12|PF13424.2|0.00096,TPR_12|PF13424.2|1.2e-07,TPR_12|PF13424.2|0.00014,TPR_12|PF13424.2|2.6e-06,TPR_12|PF13424.2|3.6e-15,TPR_12|PF13424.2|6.9e-10,TPR_12|PF13424.2|2.9e-06,TPR_12|PF13424.2|7.8e-10,TPR_10|PF13374.2|0.00039,TPR_10|PF13374.2|0.57,TPR_10|PF13374.2|0.91,TPR_10|PF13374.2|1.8e+03,TPR_10|PF13374.2|41,TPR_10|PF13374.2|2.1,TPR_10|PF13374.2|98,TPR_10|PF13374.2|1.6e+03,TPR_10|PF13374.2|0.0085,TPR_10|PF13374.2|1.7e-05,TPR_2|PF07719.13|6.3,TPR_2|PF07719.13|0.93,TPR_2|PF07719.13|1.7,TPR_2|PF07719.13|0.78,TPR_2|PF07719.13|0.004,TPR_2|PF07719.13|3.2,TPR_2|PF07719.13|9.5,TPR_2|PF07719.13|6,TPR_2|PF07719.13|17,TPR_2|PF07719.13|0.39,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|4.5,TPR_1|PF00515.24|0.1,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.077,TPR_1|PF00515.24|0.00015,TPR_1|PF00515.24|0.014,TPR_1|PF00515.24|28,TPR_1|PF00515.24|9.5,TPR_1|PF00515.24|8.7e+02,TPR_1|PF00515.24|0.15,TPR_7|PF13176.2|0.0023,TPR_7|PF13176.2|4e+02,TPR_7|PF13176.2|0.41,TPR_7|PF13176.2|0.49,TPR_7|PF13176.2|0.066,TPR_7|PF13176.2|1.8,TPR_7|PF13176.2|6.1e+02,TPR_7|PF13176.2|1e+04,TPR_7|PF13176.2|3.1e+02,TPR_7|PF13176.2|0.0038,TPR_11|PF13414.2|5,TPR_11|PF13414.2|0.0011,TPR_11|PF13414.2|7.9e-05,TPR_11|PF13414.2|3.9e-08,TPR_11|PF13414.2|0.094,TPR_11|PF13414.2|0.041,TPR_8|PF13181.2|2e+02,TPR_8|PF13181.2|0.008,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|1.3,TPR_8|PF13181.2|0.00049,TPR_8|PF13181.2|0.0075,TPR_8|PF13181.2|3,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|7.7,TPR_14|PF13428.2|70,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|6e+02,TPR_14|PF13428.2|34,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|75,TPR_14|PF13428.2|7e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|14,TPR_19|PF14559.2|96,TPR_19|PF14559.2|0.093,TPR_19|PF14559.2|4.1,TPR_19|PF14559.2|14,TPR_19|PF14559.2|0.94,TPR_19|PF14559.2|0.0063,TPR_16|PF13432.2|3.6e+02,TPR_16|PF13432.2|30,TPR_16|PF13432.2|9.3e+02,TPR_16|PF13432.2|0.074,TPR_16|PF13432.2|4.9e+02,TPR_16|PF13432.2|4.6e+03,TPR_16|PF13432.2|0.3,TPR_6|PF13174.2|1.7e+03,TPR_6|PF13174.2|2.9e+03,TPR_6|PF13174.2|2e+03,TPR_6|PF13174.2|45,TPR_6|PF13174.2|73,TPR_6|PF13174.2|19,TPR_6|PF13174.2|8.1e+02,TPR_6|PF13174.2|99,RPN7|PF10602.5|1.9e+02,RPN7|PF10602.5|66,RPN7|PF10602.5|0.7,RPN7|PF10602.5|0.56,SNAP|PF14938.2|18,SNAP|PF14938.2|0.26,SNAP|PF14938.2|1.1 R_Transcript_128329:343-2511(+)
ATGGCTGGAGCTGAAATAAGTGGAGAGAACAAAAGGAGGAGCTCCAGTCTGAGTGGAGACATAAGCCATTACAAAAGAAGCCTCAAGCAAAATGCATCACCCAAAAGTCCTTTGAGCCCTGAAAGCCCCAGCTCTGGCTCTATTGATCTAAACATTGATAAAACTGTCGACAACTCGATCGAGTTGTTGTACCAAAACATTTGTGATATGGCAAGCTCCAATGACACCCACTCAATATGTAGCTTCACAACCTATGGCAATGAATCGAGAATCGATTCTGAGCTACGACATCTTGTGGGAGCTGATACCGATACAGAGGAAGATGTAAAAGAGGTGATCAAGGAGGAGCATAAGGAAGTCTCGGATGACATAAATGATACGCCACCGCCAAGTAAAAAGAAGGTGGGAAAGACTATGAAGGGGGGTATCCATTCTAGAGTTAAGTCACTACCTTCTGTAACCTCGAAATTGGTGTGTAATAGCCCTAATGTCAAAAGCATGAGCCCAAAGCCTCCGATTGGTAAGAGGAATGCCGTGAAGAGTTCAAGAAGTTCATTTTTGTGTACTTCTCCATTTCAAGATGAGAAGAATGGAAATGGTAAGAAATCTGGTAAGAAAATGAAGGAGGGTCCTTACTTGGGTACGTATTTGCTTAAGAAAGCTAGGGATGTAATATCAGCTGGAGACGATCCCAAAAGAGCATTCGAGCTTGCCCTTCGAGCCAAACAATCATTTGAGAATTGTGGCAGCGATAAGCCAAACTTAGATTATGTTATGTGCTTGCATGTTTTGGCTTCAATGTATTGTAGCTTGGGCCAACGCAATGAAGCCATTCCTCTACTACAACGTTCCATTGAAGTACCAAAACCCGAGCTAGGCCAATTACATGCCCTTGCAAAATTTGTTGGGTGTATGCAGTTAGGTGATATATATGCAATGAAGGGCCAGATTGAGAACTCAATTGTGCAGTACAAAAATGCTTTAGAAGTTCAAAAACAAGTTCTTGGAGAGCAAGACCCTCGTTTTGGGGAGACTTGTCGATATGTGGCAGAAGCTCATGTTCAAGCATTTGAATTTGATGAGGCTGAAAAGTTCTGTCAGATGGCTCTTGACATCCATAAAGCAAACAAAGGGTCTCCGATTTCCATTGAGGAGGCTGCAGATCGCAGATTGATGGGCCTTATTTGTGAATCGAAGGGAAATTATGAAGCTGCCCTCGAACACTATGTCTTAGCTAGCACTGCCCTGAGTAATAGTGGTCAGGAAGCAGACATTGCAGCTCTTGACTGCAATATTGGTGATGCATACTTAACCTTGGCTCGATATGATGAGGCAATTTTCTCTTACCAAAAAGCACTCACTGAACTCAAGCCATGTAAAGGAGAGAACCATCCCGCCGTTGGAACTGTCTTTGTTCGTTTGGCTGAGCTCTACAACAAAATTGGAAAGTTTACAGACTCCAAGTCCTATTGTGAAAAGGCTCTTCGGATATACGAAAAAGCACCTCCTGGTTCTAATAATGAGGACATTGCTGGTGGTTTAATTGACCTGTCTGTCATCTATGAATCAATGAATGAGCTAGATCAGGCCTTCAGTTTGTTATCCAAGGCGGTTGATCTGTATGCTGATTCGCCCGGCCAACAATGCATGATTGCTGGGATTGAGGCTCAAATGGGGGTTATACATTACATGCAAGGAAAGTATGCTGACTCTTATAACTGCCTTAACAGTTCCATCTCAAAGTTCCAGGCTTCAGGAGAAAAGAAATCTTCAATTTATGGAATCACCTTAAATCAATTAGGTCTTGCCTGTGTACAGCTCTATTCAATCGGTGAGGCTGCAGAACTCTTTGAGGAAGCCAAGAGTGTTTTGGAGAAAGAATATGGATTGTATCACCCTGATACTCTCGCAGTTTACAGCAATCTTGCGGGCACCTATGATGCTCTCGGAAGATGGGATGAAGCAATCGATCTATTGGACTACGTTGTGGGGATGCGAGAAGAGAAGCTTGGAACAGCCGATCCTGTTGTTGATGATGAGAAGAGGAGATTGTCAGAGTTACTGAAAGAAGCAAGAAGAGCAAGGAGAAGAAAGTCTAGATCTCTGGAAACACTTCTTGACAAAAACTCCCAGATCTTGATAAAGAATGTTGCTGGGCCAATAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128329.p1 GENE.R_Transcript_128329~~R_Transcript_128329.p1 ORF type:complete len:723 (+),score=155.42,TPR_12|PF13424.2|0.00096,TPR_12|PF13424.2|1.2e-07,TPR_12|PF13424.2|0.00014,TPR_12|PF13424.2|2.6e-06,TPR_12|PF13424.2|3.6e-15,TPR_12|PF13424.2|6.9e-10,TPR_12|PF13424.2|2.9e-06,TPR_12|PF13424.2|7.8e-10,TPR_10|PF13374.2|0.00039,TPR_10|PF13374.2|0.57,TPR_10|PF13374.2|0.91,TPR_10|PF13374.2|1.8e+03,TPR_10|PF13374.2|41,TPR_10|PF13374.2|2.1,TPR_10|PF13374.2|98,TPR_10|PF13374.2|1.6e+03,TPR_10|PF13374.2|0.0085,TPR_10|PF13374.2|1.7e-05,TPR_2|PF07719.13|6.3,TPR_2|PF07719.13|0.93,TPR_2|PF07719.13|1.7,TPR_2|PF07719.13|0.78,TPR_2|PF07719.13|0.004,TPR_2|PF07719.13|3.2,TPR_2|PF07719.13|9.5,TPR_2|PF07719.13|6,TPR_2|PF07719.13|17,TPR_2|PF07719.13|0.39,TPR_1|PF00515.24|3.6e+03,TPR_1|PF00515.24|4.5,TPR_1|PF00515.24|0.1,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.077,TPR_1|PF00515.24|0.00015,TPR_1|PF00515.24|0.014,TPR_1|PF00515.24|28,TPR_1|PF00515.24|9.5,TPR_1|PF00515.24|8.7e+02,TPR_1|PF00515.24|0.15,TPR_7|PF13176.2|0.0023,TPR_7|PF13176.2|4e+02,TPR_7|PF13176.2|0.41,TPR_7|PF13176.2|0.49,TPR_7|PF13176.2|0.066,TPR_7|PF13176.2|1.8,TPR_7|PF13176.2|6.1e+02,TPR_7|PF13176.2|1e+04,TPR_7|PF13176.2|3.1e+02,TPR_7|PF13176.2|0.0038,TPR_11|PF13414.2|5,TPR_11|PF13414.2|0.0011,TPR_11|PF13414.2|7.9e-05,TPR_11|PF13414.2|3.9e-08,TPR_11|PF13414.2|0.094,TPR_11|PF13414.2|0.041,TPR_8|PF13181.2|2e+02,TPR_8|PF13181.2|0.008,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|1.3,TPR_8|PF13181.2|0.00049,TPR_8|PF13181.2|0.0075,TPR_8|PF13181.2|3,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|6.2e+02,TPR_8|PF13181.2|7.7,TPR_14|PF13428.2|70,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|6e+02,TPR_14|PF13428.2|34,TPR_14|PF13428.2|1.2e+02,TPR_14|PF13428.2|75,TPR_14|PF13428.2|7e+03,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|14,TPR_19|PF14559.2|96,TPR_19|PF14559.2|0.093,TPR_19|PF14559.2|4.1,TPR_19|PF14559.2|14,TPR_19|PF14559.2|0.94,TPR_19|PF14559.2|0.0063,TPR_16|PF13432.2|3.6e+02,TPR_16|PF13432.2|30,TPR_16|PF13432.2|9.3e+02,TPR_16|PF13432.2|0.074,TPR_16|PF13432.2|4.9e+02,TPR_16|PF13432.2|4.6e+03,TPR_16|PF13432.2|0.3,TPR_6|PF13174.2|1.7e+03,TPR_6|PF13174.2|2.9e+03,TPR_6|PF13174.2|2e+03,TPR_6|PF13174.2|45,TPR_6|PF13174.2|73,TPR_6|PF13174.2|19,TPR_6|PF13174.2|8.1e+02,TPR_6|PF13174.2|99,RPN7|PF10602.5|1.9e+02,RPN7|PF10602.5|66,RPN7|PF10602.5|0.7,RPN7|PF10602.5|0.56,SNAP|PF14938.2|18,SNAP|PF14938.2|0.26,SNAP|PF14938.2|1.1 R_Transcript_128329:343-2511(+)
MAGAEISGENKRRSSSLSGDISHYKRSLKQNASPKSPLSPESPSSGSIDLNIDKTVDNSIELLYQNICDMASSNDTHSICSFTTYGNESRIDSELRHLVGADTDTEEDVKEVIKEEHKEVSDDINDTPPPSKKKVGKTMKGGIHSRVKSLPSVTSKLVCNSPNVKSMSPKPPIGKRNAVKSSRSSFLCTSPFQDEKNGNGKKSGKKMKEGPYLGTYLLKKARDVISAGDDPKRAFELALRAKQSFENCGSDKPNLDYVMCLHVLASMYCSLGQRNEAIPLLQRSIEVPKPELGQLHALAKFVGCMQLGDIYAMKGQIENSIVQYKNALEVQKQVLGEQDPRFGETCRYVAEAHVQAFEFDEAEKFCQMALDIHKANKGSPISIEEAADRRLMGLICESKGNYEAALEHYVLASTALSNSGQEADIAALDCNIGDAYLTLARYDEAIFSYQKALTELKPCKGENHPAVGTVFVRLAELYNKIGKFTDSKSYCEKALRIYEKAPPGSNNEDIAGGLIDLSVIYESMNELDQAFSLLSKAVDLYADSPGQQCMIAGIEAQMGVIHYMQGKYADSYNCLNSSISKFQASGEKKSSIYGITLNQLGLACVQLYSIGEAAELFEEAKSVLEKEYGLYHPDTLAVYSNLAGTYDALGRWDEAIDLLDYVVGMREEKLGTADPVVDDEKRRLSELLKEARRARRRKSRSLETLLDKNSQILIKNVAGPII*

Click here to download the sequence:
Link to NCBI Protein BLAST