Transcript Information: R_Transcript_128377.p1


Annotated TAIR IDAT2G21860.1
Annotated Gene Nameviolaxanthin de-epoxidase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9318333-9319990 | Reverse length=522
E-Value9.2E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4341612178708
Replicate 20.48741411680692
Replicate 30.44995377421014
Condition 2: 8 Hour
Replicate 11.7489903533747
Replicate 21.7569264303789
Replicate 31.7827474716451
Condition 3: 24 Hour
Replicate 10.49195301202223
Replicate 20.63015025401649
Replicate 31.0162148604631


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128377.p1 GENE.R_Transcript_128377~~R_Transcript_128377.p1 ORF type:complete len:560 (+),score=102.69 R_Transcript_128377:120-1799(+)
ATGTTAATGTCATTTTCATCATCGATTAATTGGTTTCCAGAAACCAAACTGGATAGGGAAAAAAGCTCTTGTTTGATTGATGGTATAATTTCACCCTCTCAATTTCCATGTTTGCAATTGCCCCACAGGAGGAGGAGAAGGAGAAACCCAAGCCCCAGGGCATGGAATCCCAAACCCAACCAAACAATTTCAGCTGCTCAAACCCCAGCTAATATTAATGGCGATTCATCTAATACTAATTCTGAGCCACCACCTCCACCGGTGAAAATCGTCAGCATAGTTGGAGAAGGCAGTATCAGCCCTCTTCACTCTGTCCCATGGCAAGAAGTTCTGCTCCACACTGCAAAAAGACTGAAATGGATTGATGAAGCAATCGAAATGCTTGTCTTCCCAGACAATCTCTGTCTTTGTCAATCAAGTCAGGAAACAACCCACAATCTAGAGAGGGAGCTGATGCCTACAGACATAGATATCCTGGTAGTTGTTGCTGTGACGCGACAAGAATCAGTCAAATGGATCCAGACTCACAGTAAAAACATTCCTAATGTTGTATGCTTCGAGTCTTGTTCTTCCTTGGTCAATAAACTAGGGGCTTCCTCTATTGCTGTCAACGGTGAGACCAAAGGGAACATGTTCAGCTCATTACCAGGCTTTTCTCAATCACAAAGTGGAAAAGAGAAATTTGTGGTGGAAACTGTCAGTGAGGCTTGGGAACGACATACTTCAGATGATATCAGATTTTGTATATTAGTAATCATCAATGCTTACATTAGGCCAATTCCTATCCTGCAGAACCTGAGATCAAAGGGATTTTCAACCCTAAGCTGCATGGTGAAGAACTGTAGTTCTCAGATTCTCAATTGTTTGTTGGATCCCACTTGTAGGAAAGCCCTTCAGTGCTTAAACAATTGCAGTCCTGTCGATCAAGTATGCAATTATCGCTGCATTGCTTCATACGAGAGTCCAAATCTCGAAGCTTTCTCTCTCTGTGTACTGCAAAAACATAATTGTTTGGAACTTGATGCCACAATCCCTGAAAACCCCCGTGTACCAGCTATGGCCAAGTTCCGAGGCTCTGACTTGTGTCATGAAACTGCCGAAGATCTTTTTGTGGGTTGGTTGGGAAGTTTGGACTGGAGTTGGCGTGTTGTGGCAGGGCAAAATCCTGCTTATGATCAATTCCCTTGCCAGTACCAGCTCTTCTACCGAGGAAAGGCTAGAGGTTCGTTTTGGTATGAGCCTGTCTTTCAGGTTAAGACACTGGATGGAAAGGATGTGTGGAGGAGGAGAAGATATCGAGTGAAGAGGGATCGAGTTCCAGGCACATTCTTCTTCAGTGTTCTGGATAATGGTGTGGTTTCAAAGGAGTTCTGGACAATTGTGGATGTTGCTGATGATCTTAGCTGGGGTTTGTTTCATTATCACGGAGCTGCTCAAGCTGCAGGGCAATCCTATACTGGGGCAGTTCTTGTTAGTCCAGATGGGAAGTATCCTTGCGAGGCAGAGAATTCTCGACTAACTAGTGCTCTGGATATGTGTGGGATCAAACAGTGGGAGCTGTTCACAGTTGATAATTCTTGCTGTCAAGATGCGCCACTAGGGATTCCTGATGGTTCTAGACTGCACTCCAAAATCAACATAAGAGAACAAAAACATTCCTCTGTAAATATTGAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128377.p1 GENE.R_Transcript_128377~~R_Transcript_128377.p1 ORF type:complete len:560 (+),score=102.69 R_Transcript_128377:120-1799(+)
MLMSFSSSINWFPETKLDREKSSCLIDGIISPSQFPCLQLPHRRRRRRNPSPRAWNPKPNQTISAAQTPANINGDSSNTNSEPPPPPVKIVSIVGEGSISPLHSVPWQEVLLHTAKRLKWIDEAIEMLVFPDNLCLCQSSQETTHNLERELMPTDIDILVVVAVTRQESVKWIQTHSKNIPNVVCFESCSSLVNKLGASSIAVNGETKGNMFSSLPGFSQSQSGKEKFVVETVSEAWERHTSDDIRFCILVIINAYIRPIPILQNLRSKGFSTLSCMVKNCSSQILNCLLDPTCRKALQCLNNCSPVDQVCNYRCIASYESPNLEAFSLCVLQKHNCLELDATIPENPRVPAMAKFRGSDLCHETAEDLFVGWLGSLDWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFQVKTLDGKDVWRRRRYRVKRDRVPGTFFFSVLDNGVVSKEFWTIVDVADDLSWGLFHYHGAAQAAGQSYTGAVLVSPDGKYPCEAENSRLTSALDMCGIKQWELFTVDNSCCQDAPLGIPDGSRLHSKINIREQKHSSVNIEI*

Click here to download the sequence:
Link to NCBI Protein BLAST