Transcript Information: R_Transcript_128642.p1


Annotated TAIR IDAT5G37590.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14927403-14932709 | Reverse length=551
E-Value2E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2913184614237
Replicate 20.40145889897319
Replicate 31.5329556708706
Condition 2: 8 Hour
Replicate 10.46818097413471
Replicate 20.55581541861456
Replicate 31.3535617862239
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.83700591536892


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128642.p1 GENE.R_Transcript_128642~~R_Transcript_128642.p1 ORF type:complete len:523 (+),score=115.56,TPR_12|PF13424.2|1,TPR_12|PF13424.2|5.7e-17,TPR_12|PF13424.2|7.5e-13,TPR_12|PF13424.2|6.6e-05,TPR_12|PF13424.2|1.4e+03,TPR_10|PF13374.2|13,TPR_10|PF13374.2|2.9e-08,TPR_10|PF13374.2|2.5e-05,TPR_10|PF13374.2|7.6,TPR_10|PF13374.2|6.3e-05,TPR_10|PF13374.2|1.7e+03,TPR_1|PF00515.24|6.1,TPR_1|PF00515.24|0.0069,TPR_1|PF00515.24|6e-05,TPR_1|PF00515.24|13,TPR_1|PF00515.24|1.7e+02,TPR_1|PF00515.24|5.8e+02,TPR_11|PF13414.2|0.0023,TPR_11|PF13414.2|1.2e-07,TPR_11|PF13414.2|0.022,TPR_11|PF13414.2|8.2,TPR_11|PF13414.2|40,TPR_2|PF07719.13|6.4,TPR_2|PF07719.13|0.016,TPR_2|PF07719.13|0.00048,TPR_2|PF07719.13|4.9,TPR_2|PF07719.13|49,TPR_2|PF07719.13|1e+04,TPR_2|PF07719.13|4.2e+03,TPR_8|PF13181.2|6.9e+02,TPR_8|PF13181.2|0.11,TPR_8|PF13181.2|0.015,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|0.14,TPR_8|PF13181.2|8.3e+03,TPR_8|PF13181.2|2.6e+03,TPR_8|PF13181.2|5.2e+03,TPR_16|PF13432.2|0.0022,TPR_16|PF13432.2|0.056,TPR_16|PF13432.2|4.1e+02,TPR_16|PF13432.2|1.2e+04,TPR_7|PF13176.2|8.6e+02,TPR_7|PF13176.2|0.21,TPR_7|PF13176.2|1.3,TPR_7|PF13176.2|7.2,TPR_7|PF13176.2|2.2e+03 R_Transcript_128642:140-1708(+)
ATGTTTATTCGTCAGGCAACGGCTTCTTTGCTCAAGCGACTTCGTTCCTCATCCAAATATGGGTATTCCTTTTTTCAAAGAGCAACGACCCATACACCTTCATGTAATAGAATCTATTCTTCTCATTGTAGCTTGGAACATTTCCAAGGGCAACCTAGAAGCTTCACATGGATCTTGCTATATGGTCAAGCAGCACTTATCGTGGGTGGTGGATATGCTCCTGTCATTGCTGAAGGCATGTCTAGTGTAAATTCTGAAAATGATGCTTCAGGATCAAGCAGTATTGGTTTACAGCAAGTGGAGGATGGTTCAATTATATCAAATGAACATACAATAAAGTGGCGAATATACACTGCTAACGGGAAAGATTATCTTATGCAGGGAAAATCAAAGGAAGCAGAGAGGTTCTTCATATCTGCGTTGGAGGAGGCCAAAAAAGGTTTTGGTGAGCGTGATCCACATGTTGCATCTGCATGCAACAATCTGGCAGAGCTGTATAGAGTAAGAAAAGCATATGACAAAGCAGAAACCTTGTATTTGGAGGCCATTAATATCCTAAAGGAGTCTTTTGGTCCCGATGATGTACGTGTTGGTGCTGCTTTTCACAACCTTGGTCAATTCTATATAGTGCAGCGGAAGCTTGAAGAAGCTCAAGTTTGTTATGAGCGGGCTTTGAAGATCAAAGGGCGTGTCTTAGGACATGGTCATGCAGACTATGCAGATACAATGTTTCATCTTGGAATGGTTTCCTATCTTCAAGGAAAGATGGAAGATGCAGAATTCCTTATTCAAGACTCGATCCGGATATTAGAGGAAGGAGGTCAAGGCGAAACATACTCCTGCACTAGGAAATTGCGATATTTGGCTCAGGGATGGAATTCTATGGACACTGTAATTGCTGCTGAAAGCCTCTCTAGGATATTGCAATCCATGGGAAAACTTAGGGAGGCACAAGAAATTTTAGAAAGGTGTCTTGATGCTCGGAGGTTGTTACTTCCTGAAGATCACATTCAGATTGGTGCTAACATGCTTGCCCTTGCAAATGTGGAATTGCTGAGCTCCAAACAAACAAGAGAATTGGCCACATCAGAAGCAACATCAAAGCTGGATAGAGCAAAAGAACTTTTGAAAAGTTCGATCAGAATAGCTCGTGGTGTTGTGGAAGGGGCTAAACAGAAGAAAAATGTTCGGGCTTATGAGCGATGTATTGAGAGGGATGAGCAAACTGCATTGCTTATACTGTTGCAATCACTAAAAGCTCTCGCACTTGTGGAGATGGCTGTGCAGGAAGCACAAGATAAAAAGGAAGCTTTGCCTGCGCTTGAGGCTGAAAGTGCATTACGCGAATGTACATGTGTTTTCAAACAGTATGGAGTTAAGACATCAGCTTCTGCATCCATAGAAGTGAAGCGCGAGTATCTTTCATGCTTAAAGCATCTTGTGAACTTAATTACTGATACTATGCCAAAGAATGCAGAATGTCCCCAGAGAGCAGAAATAAAAGAATTAAATGATGAAATTAAGCTTGTGGAAGCTGAAGTTTCGTCTCACCAAACACGTAAGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128642.p1 GENE.R_Transcript_128642~~R_Transcript_128642.p1 ORF type:complete len:523 (+),score=115.56,TPR_12|PF13424.2|1,TPR_12|PF13424.2|5.7e-17,TPR_12|PF13424.2|7.5e-13,TPR_12|PF13424.2|6.6e-05,TPR_12|PF13424.2|1.4e+03,TPR_10|PF13374.2|13,TPR_10|PF13374.2|2.9e-08,TPR_10|PF13374.2|2.5e-05,TPR_10|PF13374.2|7.6,TPR_10|PF13374.2|6.3e-05,TPR_10|PF13374.2|1.7e+03,TPR_1|PF00515.24|6.1,TPR_1|PF00515.24|0.0069,TPR_1|PF00515.24|6e-05,TPR_1|PF00515.24|13,TPR_1|PF00515.24|1.7e+02,TPR_1|PF00515.24|5.8e+02,TPR_11|PF13414.2|0.0023,TPR_11|PF13414.2|1.2e-07,TPR_11|PF13414.2|0.022,TPR_11|PF13414.2|8.2,TPR_11|PF13414.2|40,TPR_2|PF07719.13|6.4,TPR_2|PF07719.13|0.016,TPR_2|PF07719.13|0.00048,TPR_2|PF07719.13|4.9,TPR_2|PF07719.13|49,TPR_2|PF07719.13|1e+04,TPR_2|PF07719.13|4.2e+03,TPR_8|PF13181.2|6.9e+02,TPR_8|PF13181.2|0.11,TPR_8|PF13181.2|0.015,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|0.14,TPR_8|PF13181.2|8.3e+03,TPR_8|PF13181.2|2.6e+03,TPR_8|PF13181.2|5.2e+03,TPR_16|PF13432.2|0.0022,TPR_16|PF13432.2|0.056,TPR_16|PF13432.2|4.1e+02,TPR_16|PF13432.2|1.2e+04,TPR_7|PF13176.2|8.6e+02,TPR_7|PF13176.2|0.21,TPR_7|PF13176.2|1.3,TPR_7|PF13176.2|7.2,TPR_7|PF13176.2|2.2e+03 R_Transcript_128642:140-1708(+)
MFIRQATASLLKRLRSSSKYGYSFFQRATTHTPSCNRIYSSHCSLEHFQGQPRSFTWILLYGQAALIVGGGYAPVIAEGMSSVNSENDASGSSSIGLQQVEDGSIISNEHTIKWRIYTANGKDYLMQGKSKEAERFFISALEEAKKGFGERDPHVASACNNLAELYRVRKAYDKAETLYLEAINILKESFGPDDVRVGAAFHNLGQFYIVQRKLEEAQVCYERALKIKGRVLGHGHADYADTMFHLGMVSYLQGKMEDAEFLIQDSIRILEEGGQGETYSCTRKLRYLAQGWNSMDTVIAAESLSRILQSMGKLREAQEILERCLDARRLLLPEDHIQIGANMLALANVELLSSKQTRELATSEATSKLDRAKELLKSSIRIARGVVEGAKQKKNVRAYERCIERDEQTALLILLQSLKALALVEMAVQEAQDKKEALPALEAESALRECTCVFKQYGVKTSASASIEVKREYLSCLKHLVNLITDTMPKNAECPQRAEIKELNDEIKLVEAEVSSHQTRKI*

Click here to download the sequence:
Link to NCBI Protein BLAST