Transcript Information: R_Transcript_128707.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value4E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.520646988985
Replicate 21.9996476586951
Replicate 32.5633730167123
Condition 2: 8 Hour
Replicate 12.2153877809412
Replicate 21.9698872098187
Replicate 33.8896308472258
Condition 3: 24 Hour
Replicate 14.6462228913211
Replicate 24.8311519474598
Replicate 34.9507903458458


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128707.p1 GENE.R_Transcript_128707~~R_Transcript_128707.p1 ORF type:complete len:420 (+),score=24.42,LRR_8|PF13855.2|3.9e-08,LRR_8|PF13855.2|2e-05,LRR_8|PF13855.2|16,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|7,LRR_8|PF13855.2|1.6,LRR_8|PF13855.2|0.91 R_Transcript_128707:277-1536(+)
ATGGATCATAGCAATAATGCCAGAGTTTCCCACACCTTCAAATCCCTGCTCTTTCTGTTTCTTTTTTTCCTCATCACTCCCTTGAGTCTTTGTACCGAGCCTTGCAATCACATTGACAAGGGCATCCTGCTTCAAATCAAAAACAAGTTGGGCAATCCTGAATCATTGTCATCATGGTCAGCTAGCACAGATTGCTGCAACGATTGGTGGGGTGGCTATCCATATACATTGACCCAACTTGAGTGCAACGAGCAGGGTCGAGTTACTTCCCTTTCTATCGAAGAAGCTTACGATATCCCCTACGAGATACTACCGGATTTTGGTGATCTTCCCTTCCTTGGGTCACTTAAGCTCACCTTCGGGAACTTCTCAGGCCCCATTGTACCATCCATTTGCACTAAGTTCAACAAAATCACGTCTCTCACCATCGCCAATTTCAACGTCACAGGCTCAATCCCGGATTGTCTGGGCCAGCTCCAAAATTTAAAAGAGCTCAGTCTTTACTCCAATAGCCTTCGTGGCCAAATTCCAGAGTCCCTTAGCCAACTTTCCAACCTCGAGACCTTAGACCTGAGCCAAAATAACCTTAGTGGTACGATACCAAACTTATCTAACTCAAGTCATAGCTTGTCACTGCTCAATGTTGCTGAAAATAATTTATCCGGTCCTATACCAAAGTTTATTGGATGCAGTTTACACAATTTGAGAGGCCTTCACCTGTCAAGTAATAAGTTTAATGGTTCAATTCCATCGTCTCTTGGACGGTTGGCTAAACTAGTTGGTTTTAGTCTTTCACTAAACCAGCTTAGTGGTCGGATCCCAGAGAGCTTTGGGTTCTTGCCAGATTCTATATCGCTCCGGCTAGATAACAACCGGTTAACAGGACCCCTGCCAAAGTCGATGGCCCGGTTTAGTCCACGGTTTTTGCAGCTTACCAACAATAGTTTAACTGGAGACGCCTCGTTCTTGTTTCGGTATGAGAAATCTTTGATGCAGAGAGTTAACCTTAGTAACAATCGTTTCAAGTTTAATTTCTCAAACGTGGAACTCCCTAGAAATATGAGGAGCCTTAAGATTAGCAACAACAGGTTATATGGAAACCTTCCTACAAATGTTGCTCAAGTGCCATCTCTTTGGTCTATTGATTTTACGTACAATCAGCTTTGTGGTCAAATCCCTGCAGGGTGGGAAAATTTTCTATATATCTACTTTGAGCATAACAAGTGCCTTTGTGGTCCTCCGTTACCCCCTTGCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128707.p1 GENE.R_Transcript_128707~~R_Transcript_128707.p1 ORF type:complete len:420 (+),score=24.42,LRR_8|PF13855.2|3.9e-08,LRR_8|PF13855.2|2e-05,LRR_8|PF13855.2|16,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|7,LRR_8|PF13855.2|1.6,LRR_8|PF13855.2|0.91 R_Transcript_128707:277-1536(+)
MDHSNNARVSHTFKSLLFLFLFFLITPLSLCTEPCNHIDKGILLQIKNKLGNPESLSSWSASTDCCNDWWGGYPYTLTQLECNEQGRVTSLSIEEAYDIPYEILPDFGDLPFLGSLKLTFGNFSGPIVPSICTKFNKITSLTIANFNVTGSIPDCLGQLQNLKELSLYSNSLRGQIPESLSQLSNLETLDLSQNNLSGTIPNLSNSSHSLSLLNVAENNLSGPIPKFIGCSLHNLRGLHLSSNKFNGSIPSSLGRLAKLVGFSLSLNQLSGRIPESFGFLPDSISLRLDNNRLTGPLPKSMARFSPRFLQLTNNSLTGDASFLFRYEKSLMQRVNLSNNRFKFNFSNVELPRNMRSLKISNNRLYGNLPTNVAQVPSLWSIDFTYNQLCGQIPAGWENFLYIYFEHNKCLCGPPLPPCK*

Click here to download the sequence:
Link to NCBI Protein BLAST