Transcript Information: R_Transcript_128717.p1


Annotated TAIR IDAT5G51940.1
Annotated Gene NameRNA polymerase Rpb6
Annotated Gene Symbol(s)NRPB6A, NRPD6A, NRPE6A
Annotation TypeOrtholog
Chromosome Positionchr5:21104679-21105796 | Forward length=144
E-Value5.6E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1311.19383781542
Replicate 2330.06771563523
Replicate 3330.14535794175
Condition 2: 8 Hour
Replicate 1344.51440750949
Replicate 2387.95348145442
Replicate 3367.47491430783
Condition 3: 24 Hour
Replicate 1376.79701792602
Replicate 2352.42144451027
Replicate 3363.06038823301


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128717.p1 GENE.R_Transcript_128717~~R_Transcript_128717.p1 ORF type:complete len:143 (+),score=49.18,RNA_pol_Rpb6|PF01192.18|9.2e+03,RNA_pol_Rpb6|PF01192.18|9.8e-17 R_Transcript_128717:273-701(+)
ATGGCTGACGATGATTACAATGACATTGACATGGGATATGAGGATGAGCCTCCAGAGCCTGAAATTGAGGAAGGGGAGGAGGAGGAGAATGTGCAACAAGATGATGATTTGAATGAGCCTGTGATAGAAGGCGATGAACGAGATGGGGAAGGAAAGGAGAAGAAGCAAAGAAAGACATCAAAGTACATGACAAAATATGAGCGGGCTAGAATACTAGGAACACGTGCACTTCAGATCAGTATGAATGCTCCTGTCATGGTCGAATTGGAAGGTGAAACCGACCCACTTGAGATTGCCATGAAGGAACTTCGTGAACGGAAGATACCATTCACCATTCGCCGTTACTTACCTGATGGAAGTTATGAAGATTGGGGGGTGGATGAGCTAATTGTTGAGGATTCTTGGAAAAGGCAAGTGGGAGGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128717.p1 GENE.R_Transcript_128717~~R_Transcript_128717.p1 ORF type:complete len:143 (+),score=49.18,RNA_pol_Rpb6|PF01192.18|9.2e+03,RNA_pol_Rpb6|PF01192.18|9.8e-17 R_Transcript_128717:273-701(+)
MADDDYNDIDMGYEDEPPEPEIEEGEEEENVQQDDDLNEPVIEGDERDGEGKEKKQRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD*

Click here to download the sequence:
Link to NCBI Protein BLAST