Transcript Information: R_Transcript_128745.p1


Annotated TAIR IDAT3G28640.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10731518-10733032 | Reverse length=504
E-Value6.5E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6593600867926
Replicate 20.63625152776661
Replicate 30.65075959079978
Condition 2: 8 Hour
Replicate 10.97386962858362
Replicate 20.80465294504266
Replicate 30.75631710918279
Condition 3: 24 Hour
Replicate 11.3044208652105
Replicate 21.7543955935686
Replicate 31.4094355290805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128745.p1 GENE.R_Transcript_128745~~R_Transcript_128745.p1 ORF type:5prime_partial len:528 (+),score=76.84,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|0.016,PPR|PF01535.16|0.11,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|0.0007,PPR|PF01535.16|0.036,PPR|PF01535.16|1.2,PPR|PF01535.16|0.00089,PPR|PF01535.16|93,PPR|PF01535.16|4.5e+03,PPR_2|PF13041.2|0.00034,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|6.6e+02,PPR_2|PF13041.2|6.2e+03,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.83,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|23,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|75,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.0049 R_Transcript_128745:2-1585(+)
AAAAATCAATTTCCCTCCTTTTCTACCTCTAATCTAATTACTCTGCCTCCCTTCATGAATGTTACATCCATCATCAACCCCAGAGCATGGCAACGCCTTATGACCCTCATCACCCGCTGCCAAAACATGCGCCAACTCAAACCAATTCATGCTCTCTTCATCACTCACGGCCTTGCCTTCAACACATTCGCCATTAGCAAACTCCTTGAGTTCACCGCCCTTTCTAATGGGGGCGACCTCTCTTATGCCCTGCTTCTCTTTCGCCATTTCCCATCACCCAATGCCTTCTTCTATAACACCCTCATTCGGTCATACTCAAAGAGCTCTTACCCGCATTTTTCTCTTCATTATTTTAACCTCATGTTGAAGGATACTAATGTTGTACCTGACCAGCATACTTTCCCTTTTGTTTTGATAGCTTGTGGTTACGGGTGTTGGGTTTCTGAGGGTAGAAAGGTTCACACCTTGTTGATGAAAAATGGGTTGGACTCAGATGTGTATATTCAGACTGCCCTCATAAGGTTTTATTGTAATTGTGGTGGTTTGGTGGATGCCCGTAAGGTGTTTGATGAAATTCCTCAACGAGATGTTGTTAAATGGAATGTGCTCATGAATGGGTATGTTAAAGGTGGGTTGGCTTCTGAGTGTTTGAGCTTGTTTAAGGATATGTTGGTGTCCGGTGTTGAGCCTGATGAGTTCTGTGTGACTACGGCAGTTAATGCTTGCGCGAAGATTGGGATTCTTTGTCAAGGGAAATGGATGCATGAGTATATTAAGAGGAGGGGCAATATGGTTTCGGATAGTATTGTCGGGACAGCGTTAGTAGATATGTATTCCAAGTGTGGTTGTGTCGATTTGGCTATAGAGGTTTTTGAGGGAATGCCAGAGAGGAATGTGGAATGTTGGGCAGCTTTCATTGGGGGCCTAGCTGTAAATGGGTATGCTAGGGAGGCGATAATGTGCTTGGACAGGATGCAGGAAGAGGATGGCTTAAGGCCTGATGGGGTTGCTCTACTTGGGGTTTTCTCGGCTTGTACACATGCAGGGCAAGTAGAGGAAGGTTTACATTTGCTGGACAACATGGAAGCCAAGTATGGTGAAGCACCAAAGTATGAGCATTATAGTTGTGTGGTGGATATGTTGTGCAAGGCAGGGCGGTTGATTGAGGCACTTAACATTATTAGAAGAATGCCTATGAAACCACTTGTGTCTGTGTGGGGTGCATTATTGAGTGGTTGTCGAACACATAAGAATGTTGAGCTTGCCGAGCTTGCAGTTAGGGAGCTTGAATTGTTAGAAGAAGGAAGAGTAGAAGATGGCATATATGTCGAACTATCCAACATCTATTTGGCCTCGAGAAAATCTGAAGAGGCGAGTAGAGTTCGGAAAATGATAGGGGACAGAGGGGCAAAGAAGACACCAGGGTGCAGTGTGATTGAGGTTAATGGGCAGGTGAATGAATTTGTAGCCGGTGATTCTGGACACCCGCATTTAGCCCATATACATGCAACCCTGGATCTCATATCCTTGGACTCGATTCATCACTCAAAAGAAACATCAACACTAGGGGAAGGACATGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128745.p1 GENE.R_Transcript_128745~~R_Transcript_128745.p1 ORF type:5prime_partial len:528 (+),score=76.84,PPR|PF01535.16|5.5e+03,PPR|PF01535.16|0.016,PPR|PF01535.16|0.11,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|0.0007,PPR|PF01535.16|0.036,PPR|PF01535.16|1.2,PPR|PF01535.16|0.00089,PPR|PF01535.16|93,PPR|PF01535.16|4.5e+03,PPR_2|PF13041.2|0.00034,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|0.36,PPR_2|PF13041.2|6.6e+02,PPR_2|PF13041.2|6.2e+03,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.83,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|23,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|75,PPR_1|PF12854.3|0.42,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.0049 R_Transcript_128745:2-1585(+)
KNQFPSFSTSNLITLPPFMNVTSIINPRAWQRLMTLITRCQNMRQLKPIHALFITHGLAFNTFAISKLLEFTALSNGGDLSYALLLFRHFPSPNAFFYNTLIRSYSKSSYPHFSLHYFNLMLKDTNVVPDQHTFPFVLIACGYGCWVSEGRKVHTLLMKNGLDSDVYIQTALIRFYCNCGGLVDARKVFDEIPQRDVVKWNVLMNGYVKGGLASECLSLFKDMLVSGVEPDEFCVTTAVNACAKIGILCQGKWMHEYIKRRGNMVSDSIVGTALVDMYSKCGCVDLAIEVFEGMPERNVECWAAFIGGLAVNGYAREAIMCLDRMQEEDGLRPDGVALLGVFSACTHAGQVEEGLHLLDNMEAKYGEAPKYEHYSCVVDMLCKAGRLIEALNIIRRMPMKPLVSVWGALLSGCRTHKNVELAELAVRELELLEEGRVEDGIYVELSNIYLASRKSEEASRVRKMIGDRGAKKTPGCSVIEVNGQVNEFVAGDSGHPHLAHIHATLDLISLDSIHHSKETSTLGEGHA*

Click here to download the sequence:
Link to NCBI Protein BLAST