Transcript Information: R_Transcript_128907.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeOrtholog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value5.8E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9393436129865
Replicate 21.4609751780724
Replicate 32.003770286741
Condition 2: 8 Hour
Replicate 11.4117099074952
Replicate 21.1558308705185
Replicate 31.9847685569012
Condition 3: 24 Hour
Replicate 12.2364464297366
Replicate 21.0961858295516
Replicate 32.3497734653926


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128907.p1 GENE.R_Transcript_128907~~R_Transcript_128907.p1 ORF type:complete len:503 (+),score=63.13,Transferase|PF02458.11|1.5e-112 R_Transcript_128907:88-1596(+)
ATGCTACGAAATGAGCTTAGTTTTAGCCTAGTGTCATCATCTCGTTTACTCGAAGTTATCTACTCTCTTTTTCCATTACAGTTTGATTATATTATCACTCTTCTTCTATTCGTCCGATTTAGGCTTTCCCTTCAAAAACACATCACAATGGGAGTGACAATCAAAGGCTCATACACTATAAAACCATCTGAGCCAACATGGGAAGTTATGCCATTGGATCAAACAGGAGTCATAACCCATGTCCCTACTATCACCTTCTACAAGCTGTCATATGAGTGGATTAATTCCTCTAGTTACTCCTTCATAGACACTCTAAAGGAGTCATTGAGCCGCGCCTTGGTCCATTTTTATCCCTTAGCTGGTCGAGTTAAGTGGATAGGCCAGGGGCGGCTTGAGCTCCTATGCAATACCAAGGGGGTTGAGCTCTTTGAGGCTGAATCAAGCAACCAATTAAGTGACTTTGGAGATTTTGCTTCCCACACCCCACAATTCAAAAGCCTTATTCCTCAAGTAGACTATGACAAGCCTATACATGAGCTACCATTATTTCTAGCCCAATTTACTGTGTTTCGTTGTGGTGGTATTTCCCTAGGGATGACTATGTCCCATGCCATTGCTGATGGACAAAGCGCGTTTCATTTTATGGCTGAATGGGCTAGGCTTGCTCGTGGGGAGCCACTTGAGGCGGCTCCCTACCTAGATAGGAAGCTCCTACGAGCTCAAGAGCCTCCAAGAGTCACAACCTCTCATGATGGCAAGAAAGTGGAACTTGATCGCCCTCCATTGTTAATAGGTCATGAGAATGATTTGGAGGAGAGAAAGAAACCAACTACTGTGTCCATACTTCCACTAGCAAGAGAGCAAGTCGAGAGCCTTAAGAAATGTGCTAACAAGGATGTAGATAGTGCTAAAATTTTGCGTGCCTACACTCGCTACGAAGTGGTGACAGCTCATGTTTGGAGGACTTCGTGCAAGGCACGAGGACACCAAAACGATCAGCCAACATGCTTAGGGTTTTCCGTTGATGTTCGACATCGCTTGCATCCACCACTACCACCAAAATACTTTGGGAATGCCATTCTAGATGTGGTGGCTTCCTCCAAGGCAGGGGATATCATGGAAAAACCCTTAAGCTATACTTGTAGTAGGATAAGACAGGCAATTGATAAAGTCAATGACGAGTATGTGTGGTCAAACATTGAATTCTTAAAGAATCAACCTGATTTGTCCTTGTACCAAGACTTACATGGACAAAAGAGCAATGAAGGGCCCTTTTATGGTAACCCAAATTTTGGGGTTATAAGTTGGCTAAATCTTCCCATTTATGGGCAGGATTTCGGGTGGGGAAAAGAGATCTATATGGGCCCTGGTACCCATGATACAGATGGCGGTTGTTTGATGCTTCCTGGGCCGGAAAATGATGGATCTGTTAAAATTGCTTTGTGCTTGCAAGTGGCCCATATAGATGATTTCAAGAAATACTTCAATGAGGATATACCCAACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128907.p1 GENE.R_Transcript_128907~~R_Transcript_128907.p1 ORF type:complete len:503 (+),score=63.13,Transferase|PF02458.11|1.5e-112 R_Transcript_128907:88-1596(+)
MLRNELSFSLVSSSRLLEVIYSLFPLQFDYIITLLLFVRFRLSLQKHITMGVTIKGSYTIKPSEPTWEVMPLDQTGVITHVPTITFYKLSYEWINSSSYSFIDTLKESLSRALVHFYPLAGRVKWIGQGRLELLCNTKGVELFEAESSNQLSDFGDFASHTPQFKSLIPQVDYDKPIHELPLFLAQFTVFRCGGISLGMTMSHAIADGQSAFHFMAEWARLARGEPLEAAPYLDRKLLRAQEPPRVTTSHDGKKVELDRPPLLIGHENDLEERKKPTTVSILPLAREQVESLKKCANKDVDSAKILRAYTRYEVVTAHVWRTSCKARGHQNDQPTCLGFSVDVRHRLHPPLPPKYFGNAILDVVASSKAGDIMEKPLSYTCSRIRQAIDKVNDEYVWSNIEFLKNQPDLSLYQDLHGQKSNEGPFYGNPNFGVISWLNLPIYGQDFGWGKEIYMGPGTHDTDGGCLMLPGPENDGSVKIALCLQVAHIDDFKKYFNEDIPNE*

Click here to download the sequence:
Link to NCBI Protein BLAST