Transcript Information: R_Transcript_128923.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeHomolog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41017889785885
Replicate 20.09436539512943
Replicate 30.15442744446844
Condition 2: 8 Hour
Replicate 10.27512207805894
Replicate 20.30149503606093
Replicate 30.85659286073736
Condition 3: 24 Hour
Replicate 10.77385867059677
Replicate 20.19824951811755
Replicate 30.39348682583186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128923.p1 GENE.R_Transcript_128923~~R_Transcript_128923.p1 ORF type:5prime_partial len:445 (+),score=79.10,zf-4CXXC_R1|PF10497.5|5.2e-07,zf-4CXXC_R1|PF10497.5|1.6e+04 R_Transcript_128923:1-1335(+)
GGTGTTTGTGAAAATGCCAAAGTGAGTGAACAAACTTGGAAGGAATCTGCTTCTGTAATGTGGACGGAATCTGCTTATTCTAGTTGTAATGAGATGAAAAAGCCAAAGCGAAGGGGCCCACTCGCTGATGAGAATGGGATCCTTATTGGTTCAATGATGTGTCATCAGTGCCAAAGGAATGATAAGGGAGAAGTGATCAGGTGTACCAAATGCAAGACTAGACGGTTTTGTAAACCCTGCATTCAGAACTGGTATCCCAAAATGAAAGAGGGAGATATTGCTCATGCTTGCCCAGTCTGCCGTAGCAACTGCAACTGCCGGGCATGCTTACGAATATATGGAGTCATCAGAGGGCAGTTGAAGCAATATTTGAACATTAGCATAGAAAAAAAGATTGAGCATTCCAAATATCTGCTGAGGAAAATGTTGCCGTTTCTGAAGCAATTCAACAAGGAACAGTTGTTAGAAAAGGAGATGGAGGCCAAAATTAAGGGTGTTTCAGCATCTGAAATAAAATTGCCAAGAAAATTGAGTTCAAAAAATGATCATATATGCTGCATCAATTGCAGAGCTTCGATTGTTGATTTTCACAGAAGTTGTCCCAAGTGTAAATATGATTTGTGTCTTACGTGCTGCCAGGAAATTCGTGCCAGACAACTGGAGGAAGCGAATCTGGAATCTGTTAAGAGATTGGTAGAGAGTAAGAGAATCGCCAAACCTAAGAGAACAACTAGACGCACGTGCCATGATGTGGAACTTGTTAATCAGGCTAATGGAAAACCTGAGTGGAAAGCCGATAAAAAGGGTACTATACCATGCCCACCTGCAGAATTTGGTGGTTGCAATGCTGGCCATCTTAAATTAAAATCTATCTGCTTAGATGGTCAGGCTTCAGAATTGCTGAGGAAAGCCGAGCAAATAGCTGTCAACTGGGGACTTGAAAATTTGCCCCAGGCTCCCTCCAATGGTTGCTGCTCATGCTCTAATTCTATGATCGATGATGACATTGGCACTGAAAGTAATTTGGTGAAATGTGCTTGCAGAGACAGAGAAGGCTCTGATGACAACTCTTTGTATTGTCCAGATGCTAGAGATCTTCAACATGGAGATCTGAAACATTTCCAATGGCATTGGACCCGAGGAGAACCAATAATTGTCAGGCATGTTCTTGAAACTACCTCTGGTTTAAGTTGGGAGCCACTGGTCATGTGGCGTGCTTTCCGTCAAATAAAAAGCACCAAACATTCCACGCTAGATGATTTTAAAGTCATTGATTGCTCAAATTTGACCCGAAGCTTCTGTCAACCTCCTCCAATTTTTTGTTCGGTATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128923.p1 GENE.R_Transcript_128923~~R_Transcript_128923.p1 ORF type:5prime_partial len:445 (+),score=79.10,zf-4CXXC_R1|PF10497.5|5.2e-07,zf-4CXXC_R1|PF10497.5|1.6e+04 R_Transcript_128923:1-1335(+)
GVCENAKVSEQTWKESASVMWTESAYSSCNEMKKPKRRGPLADENGILIGSMMCHQCQRNDKGEVIRCTKCKTRRFCKPCIQNWYPKMKEGDIAHACPVCRSNCNCRACLRIYGVIRGQLKQYLNISIEKKIEHSKYLLRKMLPFLKQFNKEQLLEKEMEAKIKGVSASEIKLPRKLSSKNDHICCINCRASIVDFHRSCPKCKYDLCLTCCQEIRARQLEEANLESVKRLVESKRIAKPKRTTRRTCHDVELVNQANGKPEWKADKKGTIPCPPAEFGGCNAGHLKLKSICLDGQASELLRKAEQIAVNWGLENLPQAPSNGCCSCSNSMIDDDIGTESNLVKCACRDREGSDDNSLYCPDARDLQHGDLKHFQWHWTRGEPIIVRHVLETTSGLSWEPLVMWRAFRQIKSTKHSTLDDFKVIDCSNLTRSFCQPPPIFCSVF*

Click here to download the sequence:
Link to NCBI Protein BLAST