Transcript Information: R_Transcript_128925.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeHomolog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value1E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8343771705737
Replicate 20.64764707751765
Replicate 31.2763953287408
Condition 2: 8 Hour
Replicate 11.3643865045231
Replicate 21.1347313173139
Replicate 32.0770499714871
Condition 3: 24 Hour
Replicate 11.3706153568779
Replicate 21.3606229365331
Replicate 32.4827844122451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128925.p1 GENE.R_Transcript_128925~~R_Transcript_128925.p1 ORF type:complete len:1005 (+),score=219.74,JmjC|PF02373.18|2.1e-15,zf-4CXXC_R1|PF10497.5|1.2e+04,zf-4CXXC_R1|PF10497.5|4.7e+03,zf-4CXXC_R1|PF10497.5|1.6e-06,zf-4CXXC_R1|PF10497.5|1.6e+04 R_Transcript_128925:84-3098(+)
ATGCTCGATCACCTGACTGAAGTGGAAATTGTGGAAGAGCAGTGCAAGAGTAACGGGAAATTGGCTGACAATTTGTGCTGTGAAAGGAACAACGGAACGTTGTGGAGGTGCAAGAAACGTAAGGCTGAGGGTCAAAGACTGTGCCTTTATTCACCATTGGGAATGGGATTCTCGGCATGGAAGAAGAAACCCCATAATTCTCAAGAGTCAGAATTAGTTGATCGTGTAGCGGAAAAGCCCCCTTCTAAAATCGAAAGCAAAGAAGTTAAATTTAAGGGAATGTATGGGCGGGAAAAACGAACTCGAGGGAGTGCCAAGAGAAGTGAGGATCTTACTGAGGAAGAGATGACACGTCGTAGGGGCCGTAGAATCTTGCAAAGGGAGACACAAGATGATGTGGGTATTGGGCTTCTTCATGGTAGAGGAGAAGATGAGGAAGAAACGCGATGCACACCAGGTGTTTGTGAAAATGCCGCAGAGAAAAACGATGGTTTTGGTGGTTCCAAGGAGGTCAGCAACGGAAAGGAGATGGACCCAATTGTTGATGAGGAAAGTATGAGTATTGAGCATGTTGAGGATGAGGTTGAAGGTGAGGAAGAGGGGATTGAGGAAGGGTTGGGAAAGGGCACAACAAGTGCTTGTGAAAATGTCTCAGAGAAGAATGTAGGGTACGTTGAGGATGAAGGCGGAAACGAGAAGGAAGAGGATGTGCAGGAAATCAGAGAGGGAGACGACGAGGTGGAAGAAGACGGTGGGCATAAGGTGGAAAAGTGCACATCAGGTGTTTGTGAAAATGCCAAAGTTGGTGAACAAAGTTGGAAGGAATCTGCTTCCGTAATGGGGACGGAATCTGCTTATTCTAGTTGTAATGAGATGAGAAAGCCAAAGCGAAGGGGCTCACTCGTTGATGAGAATGGGATCCTTATTGGTTCAATGATGTGTCATCAGTGCCAAAGGAATGATAAGGGAGAAGTGATCAGGTGTACCAAATGCAAGACTAGACGGTTTTGTAAACCCTGCATTCAGAACTGGTATCCCAAAATGAAAGAGGGAGATATTGCTCATGCTTGCCCAGTCTGCCGTAGCAACTGCAACTGCCGGGCATGCTTACGAATATATGGAGTCATCAGAGGGCAGTTGAAGCAATATTTGAACATTAGCATAGAAAAAAAGATTGAGCATTCCAAATATCTGCTGAGGAAAATGTTGCCGTTTCTGAAGCAATTCAACAAGGAACAGTTGTTAGAAAAGGAGATGGAGGCCAAAATTAAGGGTGTTTCAGCATCTGAAATAAAATTGCCAAGAAAATTGAGTTCAAAAAATGATCATATATGCTGCATCAATTGCAGAGCTTCGATTGTTGATTTTCACAGAAGTTGTCCCAAGTGTAAATATGATTTGTGTCTTACGTGCTGCCAGGAAATTCGTGCCAGACAACTGGAGGAAGCGAATCTGGAATCTGTTAAGAGATTGGTAGAGAGTAAGAGAAATGCCAAACCTAGGAGAACCGCTAGACGCACATGCCATGATGTGGAACTTGTTAATCAGGCTAATGGAAAACCTGAGTGGAAAGCCGATAAAAAGGGTACTATACCATGCCCACCTGCAGAATTTGGTGGTTGCAATGCTGGCCATCTTAAATTAAAATCTATCTGCTTAGATGGTCAGGTTTCAGAATTGCTGAGGAAAGCTGAGCAAATAGCTGTCGATTGGGGACTTGAAAATTTGTCCCAGGCTCCCTCCAATGGTTGCTGCTCATGCTCTAATTCTACGATCGATGACAACATTGGCACTGAAAGGAATTTGCTGAAATGTGCTTGCAGAGACAGAGAAGGCTCTGATGACAACTCTTTGTATTGTCCAGATGCTAGAGATCTTCAACATGGAGATCTGAAACATTTCCAATGGCATTGGACCCGAGGAGAACCAATAATTGTCAGGCATGTTCTTGAAACTACCTCTGGTTTAAGTTGGGAGCCACTGGTCATGTGGCGTGCTTTCCGTCAAATAAAAAGCACCAAACATTCCACGCTAGATGATTTTAAAGTCATTGATTGCTCAAATTTGACTGAAGCTTCTGTCAACCTCCACCAATTTTTTGATGGGTATTCTAAAGGTCGGTTTGACCGGTGGGAAGCACCTATCTTGTTGAAATTGGAGAATTCGTCACCAGCTGGTGACTTGGAGGCTCGTTCGCCACGCCATGCTGTCGAATTCATTTGTGCGTTGCCATTTAAGGAGTACACACATCCCAGCAATGGCACTCTGAACCTTCCTGCTAAGCTGCAGTACAGTACTGGGAGGACAGGCTTGGGCCCAAAAATTTTTATTGCTTACGGATATCCTCAGGAGTTGGGTTGTCGAGACTCGGTTACTATGCTTCACTCTGAGATTTCTGATACGGTCAATATTATGACACATATTAGAGAAGTTCCTGAGATTGGTAAACATAAGGTCAAAGTGAGAGAAGATCCTGATAAATGTCGTGAAAACGAAGCCTCAGCTCATGCATATGGTAGTGTTTTATCAGAGCATTATGGTGGAGGCTCTCTTTGGGACATCTTTAGACGGGAAGATGTCCCCAAGCTCGAGGAGTATCTTAGAAAGCATGATCTGGAGTTGAGGGACGTTCAACATTTTCAATCGAAGAAAACCATACACCCTATTCATGATCAGACATTTTACTTAACTGAGGCACATAAAAGGAAGCTCAAAGAAGAATTTCGTATTGAGGCATGGACATTTGTCCAAAAACTCGGAGAAGCAGTCTTCATACCTGCTGGCTGTCCTTATCAGGTCAGAAATTTGAGCCCATGCATCAATGTTGCACTTGGTTTTGTATCACCTGAGAATCTTCATGAGTGTATTCGTCTTGCTGGAGAGTTCCGTTCTCTGCCCCATGATCACAGGGCCAAGGAGGATAAATTGATGGTCAAGGAAATGATTTTTTTCGCTGTCAAGAGGGTTGTCGAAGATTTGGAACAGCATCCTGAATTTAATCTGGATCAAAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128925.p1 GENE.R_Transcript_128925~~R_Transcript_128925.p1 ORF type:complete len:1005 (+),score=219.74,JmjC|PF02373.18|2.1e-15,zf-4CXXC_R1|PF10497.5|1.2e+04,zf-4CXXC_R1|PF10497.5|4.7e+03,zf-4CXXC_R1|PF10497.5|1.6e-06,zf-4CXXC_R1|PF10497.5|1.6e+04 R_Transcript_128925:84-3098(+)
MLDHLTEVEIVEEQCKSNGKLADNLCCERNNGTLWRCKKRKAEGQRLCLYSPLGMGFSAWKKKPHNSQESELVDRVAEKPPSKIESKEVKFKGMYGREKRTRGSAKRSEDLTEEEMTRRRGRRILQRETQDDVGIGLLHGRGEDEEETRCTPGVCENAAEKNDGFGGSKEVSNGKEMDPIVDEESMSIEHVEDEVEGEEEGIEEGLGKGTTSACENVSEKNVGYVEDEGGNEKEEDVQEIREGDDEVEEDGGHKVEKCTSGVCENAKVGEQSWKESASVMGTESAYSSCNEMRKPKRRGSLVDENGILIGSMMCHQCQRNDKGEVIRCTKCKTRRFCKPCIQNWYPKMKEGDIAHACPVCRSNCNCRACLRIYGVIRGQLKQYLNISIEKKIEHSKYLLRKMLPFLKQFNKEQLLEKEMEAKIKGVSASEIKLPRKLSSKNDHICCINCRASIVDFHRSCPKCKYDLCLTCCQEIRARQLEEANLESVKRLVESKRNAKPRRTARRTCHDVELVNQANGKPEWKADKKGTIPCPPAEFGGCNAGHLKLKSICLDGQVSELLRKAEQIAVDWGLENLSQAPSNGCCSCSNSTIDDNIGTERNLLKCACRDREGSDDNSLYCPDARDLQHGDLKHFQWHWTRGEPIIVRHVLETTSGLSWEPLVMWRAFRQIKSTKHSTLDDFKVIDCSNLTEASVNLHQFFDGYSKGRFDRWEAPILLKLENSSPAGDLEARSPRHAVEFICALPFKEYTHPSNGTLNLPAKLQYSTGRTGLGPKIFIAYGYPQELGCRDSVTMLHSEISDTVNIMTHIREVPEIGKHKVKVREDPDKCRENEASAHAYGSVLSEHYGGGSLWDIFRREDVPKLEEYLRKHDLELRDVQHFQSKKTIHPIHDQTFYLTEAHKRKLKEEFRIEAWTFVQKLGEAVFIPAGCPYQVRNLSPCINVALGFVSPENLHECIRLAGEFRSLPHDHRAKEDKLMVKEMIFFAVKRVVEDLEQHPEFNLDQN*

Click here to download the sequence:
Link to NCBI Protein BLAST