Transcript Information: R_Transcript_128937.p1


Annotated TAIR IDAT4G34530.1
Annotated Gene Namecryptochrome-interacting basic-helix-loop-helix 1
Annotated Gene Symbol(s)CIB1
Annotation TypeOrtholog
Chromosome Positionchr4:16498466-16499946 | Forward length=335
E-Value3.1E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0552597992984
Replicate 22.2194820736044
Replicate 34.0680041396973
Condition 2: 8 Hour
Replicate 13.0024950675269
Replicate 22.2219058066294
Replicate 31.304766936772
Condition 3: 24 Hour
Replicate 11.2134147583353
Replicate 20.97919754059646
Replicate 31.341952295814


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_128937.p1 GENE.R_Transcript_128937~~R_Transcript_128937.p1 ORF type:complete len:473 (+),score=95.26,HLH|PF00010.22|2.6e-07 R_Transcript_128937:739-2157(+)
ATGAATAGAGCTTTGCTGGAGATGCTACACTGCCCAAATATGCCGGGCAGTATTACTGGAGTTAAGGGTATGGAGATGAGTGTGCTGGAAAGGCAGAGACTGGTTCTCAAGCTGCAACAAGAGCAACTTCTCCAGTTCCAGCCACACCAAGATCAGAGCTGCTTTAATGAACTGAGCATGCTGTCTTCCCTACCAGCTCAAGCACAAAATTTTCAGGGCCTGAATATGGATGGTTGCCCAAACAGAGTCACGGCTGACCCAACTTTAAACAAGCTTCTGGCCCGACCCATCAAAGCTGACCCGGGTATGGACAACAATTGGATGGATTTTGGGATGCCAAAAAGTGGGGTCAATATGGAAAATTCAGTTGTTGAGTCTACTGAGCAAGTCAACAATTCTGAATATGATGTGAGTTATGCCATTTCAAGAACAGCTAGTTGCCCACCATTGGTGGCAGCAGCTGTCATGAAGGCGGCAACAGAAACCAAAGGAAGAGAATCTCCTACAGCAACCCAGAAGCTTAGTGCACCTACTGGGAGAGAGAGTTTTAAGAAAAGAAAGGCAGAAAGGAACCAGACACAAAAGGGGGATTCTGAACAAGATAGCAGATCAAAGAAGAGCAAGGGATGTATAGAAGAGGAAGAATCAAAGATCACAGAGCAAAATAGCAACAGAATTAGCAATAGCAGCCACAGCAACCAAAAAGAATGTAATGGCAATAACAGTGACAACAAAAACAGAGATGCTTCAGTGTGTACATCCAAGAATAACTCAAAGGCCTCTGAGGTCCAGAAGCCTGATTACATTCATGTCAGAGCACGGCGTGGCCAGGCCACTGATAGTCACAGCTTAGCTGAAAGAGTAAGGAGGGAGAAAATCAGCGAAAGAATGAAATATCTGCAAGATCTAGTTCCTGGATGCAACAAGATCACAGGGAAAGCAGGAATGCTCGATGAAATAATCAATTATGTCCAATCTCTTCAAAGACAAGTCGAGTTCCTTTCCATGAAATTGGCAGCTGTAAATCCCAGGCTTGATTTCAACATAGATGATTTAATTGCCAAAGAGGTTTTCGCAGCATGCTCAACCAGTATACCAGCAATGGGGGTATCAACAGAAATGACTAATCCCACCTACTTACATTACAATCCAATCCAACAGATGGATCCAGTTTGTGTATCCGAAGTCCCAGTGAACACAATTGATATGGGGCTGCGAAGGAGCATTAGTGCCCCAACATCAGTACCAGAGACCTTCACTGACTTATCCTGCTTCCATAAAATTCCAAGTTCTTTACCATGGGATGCTGATTTACAAAATATCTACACCATGGAATTTCAACAAGGAAGATCATTAGCATTTCCAGTACAGACATTCACAGGCACTATCGAGGCTAGCAGTTTAAAGATGGAGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_128937.p1 GENE.R_Transcript_128937~~R_Transcript_128937.p1 ORF type:complete len:473 (+),score=95.26,HLH|PF00010.22|2.6e-07 R_Transcript_128937:739-2157(+)
MNRALLEMLHCPNMPGSITGVKGMEMSVLERQRLVLKLQQEQLLQFQPHQDQSCFNELSMLSSLPAQAQNFQGLNMDGCPNRVTADPTLNKLLARPIKADPGMDNNWMDFGMPKSGVNMENSVVESTEQVNNSEYDVSYAISRTASCPPLVAAAVMKAATETKGRESPTATQKLSAPTGRESFKKRKAERNQTQKGDSEQDSRSKKSKGCIEEEESKITEQNSNRISNSSHSNQKECNGNNSDNKNRDASVCTSKNNSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDDLIAKEVFAACSTSIPAMGVSTEMTNPTYLHYNPIQQMDPVCVSEVPVNTIDMGLRRSISAPTSVPETFTDLSCFHKIPSSLPWDADLQNIYTMEFQQGRSLAFPVQTFTGTIEASSLKMEM*

Click here to download the sequence:
Link to NCBI Protein BLAST