Transcript Information: R_Transcript_129137.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeOrtholog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value6E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56535719771253
Replicate 21.3006557780008
Replicate 30.45610760700303
Condition 2: 8 Hour
Replicate 10.70423947857121
Replicate 21.0388905280197
Replicate 30.68269331979332
Condition 3: 24 Hour
Replicate 10.25395804455425
Replicate 20.48794820554375
Replicate 30.77478600661583


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129137.p1 GENE.R_Transcript_129137~~R_Transcript_129137.p1 ORF type:5prime_partial len:452 (+),score=40.11,MatE|PF01554.14|1.8e-23,MatE|PF01554.14|5.7e+02,MatE|PF01554.14|1.3e-17 R_Transcript_129137:2-1357(+)
CGAAACTCACGCCAGCCACGAAAATACAAACTCATACTTTTCCATCTTAACTTGAACCAAAATCAATACATACTCAATTGCCTCAAAAAAAATCCCAGAGATCATGAGGAACAGGGGTACCGACGACGATGCGGCGCCGTTTCTATCAGCAAACAGAGGAGAGAGAATGCGATGGTGGAGAAAAGTGTTGGACATGGAAGAGGCCAAAGTTCAGATGGGTTTAGCTGTGCCTATGATTTTGACCAACGTGTTCTATATAATGATGCCTATGATCTCGGTCATGTTCACCGGTCATCTCGGTCAGCTTCAACTTGCTGGCTCTACTCTCGCCAATTCTTGGGCCACCGTTACTGGCTTTGCCTTCATGGCCTCAGTGGTGCTCTAGAGACACTATGTGGGCAAGGATTTGGGGCGCAACTGTATAAAATGCTAGGAATATATCTACAAGCTTCGTGCATAATATCATTCATTTTCTCCTTAATCATTTCCTTAATTTGGTGGCATACAGAGCCTATTTTGAATTTACTCCATCAAAACCCTGATATTTCAAGAGAAGCAGCTATCTACATGAGATGTCTGATCCCGGGGATATTTGCTTACGGTTTTCTCCAGAATATTTTGAGATTTCTTCAGACCCAATGCACGGTTATACCCTTGATGATCTGTTCATTGGTGCCATTGATTTTGCACTTTGGCCTTAACTATGTGTTGGTCCATTGCACTGCCCTTGCTTATAGGGGTGCTTCATTTGCTACCTCAATCACCTTCTGGCTATCGTTTATAATGTTGTTAGTTTATGTGAGCTGTTCGAAAAAATTTGAGCATACTTGGAGAGGATTTTCCATGGAATCATTTCATTATGTCTTTAGCAATTTGAGATTGGCATTGCCTTCTGCTGCTATGGTTTGTTTGGAATATTGGGCTTTTGAGATCTTAGTGTTGTTGGCTGGGTTGACCCCAAACTCAACAATAACTACTTCTGTGATTGCAATGTGTGTTAATACAGAGACTGTTGCATACAATTTTACTTATGGATTGAGTGCTGCAGCAAGCACGAGGGTGTCTAATGAGCTTGGAGCTGGAAGAGCAAATGAAGCAAAGCACGCTATGAGCATATCATTGAAGCTGTCAATTCTTGTAGCTCTGGTGGTTGTTCTTGTTCTAGGCTTGGGGCATTGTATATGGGCAGGCTTCTTCAGTGACAATGCCACTGTGATTGAAGCATTCGCTTCCATGACGCCTCTCCTTTGCATTTCAATCTTCTGTGACTCGATCCAAGGCATTCTATCAGGTCTTCTCGTCTTTTTTTTCTCTAATTTCAAGTTTCAGTTAGGATGTCATCTTATTTGGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129137.p1 GENE.R_Transcript_129137~~R_Transcript_129137.p1 ORF type:5prime_partial len:452 (+),score=40.11,MatE|PF01554.14|1.8e-23,MatE|PF01554.14|5.7e+02,MatE|PF01554.14|1.3e-17 R_Transcript_129137:2-1357(+)
RNSRQPRKYKLILFHLNLNQNQYILNCLKKNPRDHEEQGYRRRCGAVSISKQRRENAMVEKSVGHGRGQSSDGFSCAYDFDQRVLYNDAYDLGHVHRSSRSASTCWLYSRQFLGHRYWLCLHGLSGALETLCGQGFGAQLYKMLGIYLQASCIISFIFSLIISLIWWHTEPILNLLHQNPDISREAAIYMRCLIPGIFAYGFLQNILRFLQTQCTVIPLMICSLVPLILHFGLNYVLVHCTALAYRGASFATSITFWLSFIMLLVYVSCSKKFEHTWRGFSMESFHYVFSNLRLALPSAAMVCLEYWAFEILVLLAGLTPNSTITTSVIAMCVNTETVAYNFTYGLSAAASTRVSNELGAGRANEAKHAMSISLKLSILVALVVVLVLGLGHCIWAGFFSDNATVIEAFASMTPLLCISIFCDSIQGILSGLLVFFFSNFKFQLGCHLIWL*

Click here to download the sequence:
Link to NCBI Protein BLAST