Transcript Information: R_Transcript_129207.p1


Annotated TAIR IDAT3G61170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22638691-22641237 | Reverse length=783
E-Value1.9E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3684637917023
Replicate 20.76284136460598
Replicate 31.5456103222317
Condition 2: 8 Hour
Replicate 11.3979819087528
Replicate 20.77373293568116
Replicate 31.9156544080339
Condition 3: 24 Hour
Replicate 12.700918497377
Replicate 21.8315785929891
Replicate 32.8401000891303


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129207.p1 GENE.R_Transcript_129207~~R_Transcript_129207.p1 ORF type:complete len:578 (+),score=92.19,PPR_2|PF13041.2|0.038,PPR_2|PF13041.2|0.00088,PPR_2|PF13041.2|5.1e-12,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|0.0027,PPR_2|PF13041.2|5.5e-11,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|1.3e-08,PPR|PF01535.16|0.014,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|5.1e-09,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|33,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.0069,PPR|PF01535.16|7.7e-06,PPR|PF01535.16|3.9e+03,PPR|PF01535.16|8.4e-05,PPR|PF01535.16|8.6e-08,PPR|PF01535.16|7.4e+03,PPR|PF01535.16|0.00012,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.23,PPR_1|PF12854.3|0.00027,PPR_1|PF12854.3|8.9e-05,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|5.7e+03,PPR_1|PF12854.3|43,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.0058,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|15,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|8.5e-05,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|1.8e+02,TPR_14|PF13428.2|2.7e+03,TPR_14|PF13428.2|27,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|17,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|18 R_Transcript_129207:408-2141(+)
ATGGCGTATAAGCTCTTGAAGTTTCATCAACAAAAGCATTGGAGATGGGTTAGTTCTTGTCACACTACAGCAGTCTCTATTGGGTCTGGTAAATCTCAGCTCGATAACAATCGCCGTCTTGGTGAGTTGTGTAAAACTGGGAAACTCGACAATGCACGCCAACTGTTCGACGAAATGCCTGAGAAGGCTGAGTTTACTTGTAACACTATGGTTTCTGGGTATGCAAATGCTGGTAGATTTAGAGAAGCTAGAGAGATTTTTAGAGAGACCACATCTAAGAGTTCCATCACTTGGAATTCACTTATTTCTGGGTATTGTCGGAATGGTTATGGAAATGCTGCGTTTGAGTTGTTTTGGCAAATGCAATATGATGGGTTCAAGCCCACAGAGTTTACTGTGTGTAGCATTCTTGGTGTTTGTTCAAGGTTGGGTTTGGTAAACTGGGGCAAACAACTTCATTCATATGCTGTAAAAACTCGATTAGATTACAATATCAGTGTTGCTGCTGGACTTGTGGATATGTATGCAAAGTGTGATTGCATTTTAGAAGCTGAATATGTTTTCAAAATGGTTCCTGGTACCAAAAGTAATCTTGTATGGACTGCCATGCTTACTGGGTACTCTCATAATGGTGATGGGCACGAGGCAATGAATTGCTTCCGAGACATGCGTGTGGAAGGGATATATTGCAATCAGTTTACATTTGCTAGCATTTTGAATGCTTGTGCCGCGGAAATGGCTATAGATTTTGGGCAACAGGTACATGATTGCTTAATTAAGTGTGGTTTGGTGGAAAATGTGTATGGTCAAAGTGCTTTGATTGATATGTATGCAAAGTGTGGAGATTTGAATAGTGCAAAGTTAGTGCTTGAGAGTATGAAAGAGGGGAGTGTGACTGCTTGGAATTCAATGATAGTTGGTTGTATTAGAGAGGGGTTTGAAGAAGAAGCCCTATCATACTTCAACAAAATGCATGCTCAGAATCTAAAGATTGACGACTTTACATATCCATCTATTCTGAAATGCTTTGCCTCACACTCTGATCTGAAGATTGCAGGGTCTATCCATTGTTTGGCAATTAAAAGCGGATATGAAGAATGCAATCTTGTGAGTAATGCTCTTCTAGGCGTGTATGGGAAACGAGGGAACATAGATGATGCTATTAAAATGTTCAACAAGATGCCTGACAAGGATGTCATCTCATGGACTTCCCTTGTCAACTGTTTTTCACAAAATGGCTTACACGAAGAAGCTCTAAAATTGTTCGGATACATGAGAACGGAAGGGATTTATCCTGATGAATTTTTATTTTCCAGTATGTTGGGAGCTTGTGCTGAGCTAACTGTTTTAAAATTTGGTCAGCAGCTGCATGCAATCTTTGTCAAGTCAGGCAGCAGATCATCCTTATCCGTTGATAACTCTCTCATTGCATTGTATGCAAAATGTGGATGCATGGAGGATGCAATTCTAGTCTTTGATTCAATGCAAGTACGTAATTTGATTTCCTGGACGTCAGTCATTGTCGGCTATGCTCAAAATGGTCAAGCAACTGACTCAATAAAACTGTATGAAGAGATGATTGCAAGCGGCACTAAACCAGATTCAGTTACATTTATCAGCTTATTGTTTGCTTGTAGTCATGCAGGTCTTGTTGAAAAAGGTCAAGATTACTTTCAATCTATGGATATCTTATGGGATAAAGCCAGGGCCACGTCACTATGCATGTATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129207.p1 GENE.R_Transcript_129207~~R_Transcript_129207.p1 ORF type:complete len:578 (+),score=92.19,PPR_2|PF13041.2|0.038,PPR_2|PF13041.2|0.00088,PPR_2|PF13041.2|5.1e-12,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|3.9e-08,PPR_2|PF13041.2|0.0027,PPR_2|PF13041.2|5.5e-11,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|1.3e-08,PPR|PF01535.16|0.014,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|5.1e-09,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|33,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.0069,PPR|PF01535.16|7.7e-06,PPR|PF01535.16|3.9e+03,PPR|PF01535.16|8.4e-05,PPR|PF01535.16|8.6e-08,PPR|PF01535.16|7.4e+03,PPR|PF01535.16|0.00012,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.23,PPR_1|PF12854.3|0.00027,PPR_1|PF12854.3|8.9e-05,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|5.7e+03,PPR_1|PF12854.3|43,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|2.1e+02,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.0058,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|15,PPR_3|PF13812.2|6.1,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|8.5e-05,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|1.8e+02,TPR_14|PF13428.2|2.7e+03,TPR_14|PF13428.2|27,TPR_14|PF13428.2|2e+02,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|17,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|18 R_Transcript_129207:408-2141(+)
MAYKLLKFHQQKHWRWVSSCHTTAVSIGSGKSQLDNNRRLGELCKTGKLDNARQLFDEMPEKAEFTCNTMVSGYANAGRFREAREIFRETTSKSSITWNSLISGYCRNGYGNAAFELFWQMQYDGFKPTEFTVCSILGVCSRLGLVNWGKQLHSYAVKTRLDYNISVAAGLVDMYAKCDCILEAEYVFKMVPGTKSNLVWTAMLTGYSHNGDGHEAMNCFRDMRVEGIYCNQFTFASILNACAAEMAIDFGQQVHDCLIKCGLVENVYGQSALIDMYAKCGDLNSAKLVLESMKEGSVTAWNSMIVGCIREGFEEEALSYFNKMHAQNLKIDDFTYPSILKCFASHSDLKIAGSIHCLAIKSGYEECNLVSNALLGVYGKRGNIDDAIKMFNKMPDKDVISWTSLVNCFSQNGLHEEALKLFGYMRTEGIYPDEFLFSSMLGACAELTVLKFGQQLHAIFVKSGSRSSLSVDNSLIALYAKCGCMEDAILVFDSMQVRNLISWTSVIVGYAQNGQATDSIKLYEEMIASGTKPDSVTFISLLFACSHAGLVEKGQDYFQSMDILWDKARATSLCMYD*

Click here to download the sequence:
Link to NCBI Protein BLAST