Transcript Information: R_Transcript_129252.p1


Annotated TAIR IDAT5G13970.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4506383-4507804 | Reverse length=404
E-Value2.8E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9612808880454
Replicate 23.4398194299042
Replicate 33.7528059466037
Condition 2: 8 Hour
Replicate 12.5006840797187
Replicate 24.0439892691506
Replicate 35.1751400492167
Condition 3: 24 Hour
Replicate 14.7869470389681
Replicate 22.8155649647546
Replicate 34.8898063662217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129252.p1 GENE.R_Transcript_129252~~R_Transcript_129252.p1 ORF type:complete len:470 (+),score=121.42,TSSC4|PF15264.2|2.8e-08,TSSC4|PF15264.2|6.7e+03 R_Transcript_129252:91-1500(+)
ATGGACGACACTTTCAGGGTTCGAGTTGACAGAGTCTTCGGTTCTCTCTCCTCCACCTCATTATCTTCTTCTTCATCCTCTTCGCAACCTCTGAGCTCATCCTTATGGTCTCTCACCGACGAGGAGATCGAGAAGAAGTCATGGACCCGAGATTCTCTCTCCTCCTCTTTCGACGGTCAAGGCCAACCTGATAACGACGGCACCGACGACGACGATGACGAAGGTCCTTTTCCTACAAGCGTCGACCGTCTTCTCTCGGCTATGAAGGATGAATTACCTCCTGACGACGACTCTCCAAACCCTAACCCTAACCCTAGCACCAGCGCTAGTGATTTTAGGAAGGAGCTTGAGGATGATCTTGAGGAACTCGATGACGACGATGCCGGCGAAGGGACTAGTGGAGGAAAAGGTACTACGACGTCGTCCAGTGGTCCATCACGTGAGGCGTTCGACGGTGATGAGGATGAATTGGAGATTAAGAACTCTATTGGCATGGATTTTACTCTTGATTTCGAGGAAGAAGAGGATGAAAACGACAAGCTGGCTGTTGGCGAAGAAAACACTGGTGATCGTCTGTACATGTCTGGTGTAACTGATTACTTACCTGGTTTTAACTCCTACAATGAAATCCCCAACTCATTTGGAGAAGCCTCCAGAGACCCACGTGCCAACCATTTAGCTGCAAAGCTTAGGCTGAAAGAAGATGCAGAGACGGCTCGAAGTTTTAACTCTTTGCATGTTTCTGAGCCAAGTGAAGTTGTTTCTGATTCTCAAAATAATGTTTCTGAAGATGGAAATAACCCAAAGTCAATATTGAAGAGAAAAGAGGATCAGATGGGTTCAAAGTCTGAAAAACGTGTCCGGTTTGAGTCGAGCTGCAAAAAAAGTGATGAAAGGGGGTCTGAAGGAGATAAAAATGCCTCAGCAGGGGCTTTTAATGGAAAGAACACTTTGCAGAAGGAAGCAGCTTCTCAGACTCAAGATTCTGTACCAGATTATATATGCAATCCTTCAAAGTATACCCACTATACATTTGATTCATCTAGTGACATGAATGAAGCATCTAACCGCCAGGCGTATGCTGACTTCCTTAGTATGCTCAAAAAGTCGAAGCAGTTGGACGCAGATGAAGTTCCTGCTGATCTGTCAAAACCTGTTATATTCAATCCAAAGAGGAAAACTGGGCAGGACTTGACATCGATGACCAGCAATGAGAATAATCAGACTGAGGATATGGCCGTGCAGTCATCTGTGCAGAGGAAAAGTTTGCCTGTAAGTTTTGCATCCGAGGAGATGCAAGGAGATGAAACATGTGAAATGGAGGTAGAAGAGCAAGTAACTGTAGGCATGAAGGTTAATGAACGGAGAACAGTTCGTAAATATCGCTCCAAACAGACTTTGGAGTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129252.p1 GENE.R_Transcript_129252~~R_Transcript_129252.p1 ORF type:complete len:470 (+),score=121.42,TSSC4|PF15264.2|2.8e-08,TSSC4|PF15264.2|6.7e+03 R_Transcript_129252:91-1500(+)
MDDTFRVRVDRVFGSLSSTSLSSSSSSSQPLSSSLWSLTDEEIEKKSWTRDSLSSSFDGQGQPDNDGTDDDDDEGPFPTSVDRLLSAMKDELPPDDDSPNPNPNPSTSASDFRKELEDDLEELDDDDAGEGTSGGKGTTTSSSGPSREAFDGDEDELEIKNSIGMDFTLDFEEEEDENDKLAVGEENTGDRLYMSGVTDYLPGFNSYNEIPNSFGEASRDPRANHLAAKLRLKEDAETARSFNSLHVSEPSEVVSDSQNNVSEDGNNPKSILKRKEDQMGSKSEKRVRFESSCKKSDERGSEGDKNASAGAFNGKNTLQKEAASQTQDSVPDYICNPSKYTHYTFDSSSDMNEASNRQAYADFLSMLKKSKQLDADEVPADLSKPVIFNPKRKTGQDLTSMTSNENNQTEDMAVQSSVQRKSLPVSFASEEMQGDETCEMEVEEQVTVGMKVNERRTVRKYRSKQTLEC*

Click here to download the sequence:
Link to NCBI Protein BLAST