Transcript Information: R_Transcript_129494.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.977216371862
Replicate 211.739866899435
Replicate 311.945986810897
Condition 2: 8 Hour
Replicate 110.66319925122
Replicate 213.224177432959
Replicate 315.321520792477
Condition 3: 24 Hour
Replicate 117.280069956336
Replicate 216.837885819688
Replicate 314.709478956248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129494.p1 GENE.R_Transcript_129494~~R_Transcript_129494.p1 ORF type:3prime_partial len:186 (-),score=70.24 R_Transcript_129494:2-478(-)
ATGAAGGTTGTTTCTGGAGCTGCTAAGAAGAATAAGGTTAACCCAAAAATGCAAAAATTGTTTCGTCGAAGGGCGAGGGAATATAATTCAGATGATGAGGATGAGGAGGAGACTATGCAAGAAGGTTCTGATGGAGAAATGGAGATGGAAGGGAATGATGGAATTAGAAGTGATGATGACGATATAGGGGAAGGAGGAAGTTCGGATGAAGAAGGTGGTGAAGTTAAAGCTCAACCTGGGGTTATGAAGTTTGTGGAAGGATGTAAAGCATTTAGGGTGGCATTTCAATCGATCATGAAAACTCGTATTGATGATGAGACATTGGGTCCGGTATTGTCAGCAAAGAAGAAGCTTGTTGTGTCAAAGCTTGCTGAAGAAGAGGCTGAGAAAAAGGCTAAGGGGGAAGCAAAGAGGGAAAAGCACTTGGTTCATAATTCTATGGCTCCGAAAAAACCTCGTGCAACTAAAGTAGTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129494.p1 GENE.R_Transcript_129494~~R_Transcript_129494.p1 ORF type:3prime_partial len:186 (-),score=70.24 R_Transcript_129494:2-478(-)
MKVVSGAAKKNKVNPKMQKLFRRRAREYNSDDEDEEETMQEGSDGEMEMEGNDGIRSDDDDIGEGGSSDEEGGEVKAQPGVMKFVEGCKAFRVAFQSIMKTRIDDETLGPVLSAKKKLVVSKLAEEEAEKKAKGEAKREKHLVHNSMAPKKPRATKVVD

Click here to download the sequence:
Link to NCBI Protein BLAST