Transcript Information: R_Transcript_129506.p1


Annotated TAIR IDAT4G18750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)DOT4
Annotation TypeHomolog
Chromosome Positionchr4:10304850-10307465 | Forward length=871
E-Value3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91463638770922
Replicate 20.13723072167515
Replicate 30.69868044955585
Condition 2: 8 Hour
Replicate 10.48011499896559
Replicate 20.43844866355266
Replicate 30.87001183801419
Condition 3: 24 Hour
Replicate 10.70023812894958
Replicate 20.67270942149909
Replicate 30.81065572914435


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129506.p1 GENE.R_Transcript_129506~~R_Transcript_129506.p1 ORF type:complete len:459 (+),score=77.25,PPR_2|PF13041.2|68,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|4e-13,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|0.00048,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.1e+02,PPR|PF01535.16|4.3,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.013,PPR|PF01535.16|0.23,PPR|PF01535.16|0.0047,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.028,PPR|PF01535.16|6.2,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.1e+03,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|5.4e+03,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.89,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|4.9e+02,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|5.6e+02,PPR_1|PF12854.3|9.1e-06,PPR_1|PF12854.3|7.2,PPR_1|PF12854.3|14,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|0.59,PPR_1|PF12854.3|36,PPR_1|PF12854.3|42 R_Transcript_129506:419-1795(+)
ATGGCGGTAAGTGGGTTGTTACCCAATGAGGTAACTATCTCAAGTATTTTACCAACTTTTGCTAATCTGGGGTTCAAGAAGACTGGCAAATCAGTGCATTGTTTCTGGATTCGTCAAGTATTTGGCCATAATGTTGTTGTTGAAAATTGTTTTGTTGATTTGTATTCACATTTCGGGTATATGGGTATTGCCCGGTATCTGTTCGACAAAATGCCTGTGAGAAATCTTGTATCTTGGAATGTCATCATTTCAGGCTATGCCAACAATGGGATGGGTAGCGATGCGATGGAGCTTTTTAATTTGATGAGAAGTAATGGAGTTTGTCCTGATTATTATACTTTTATGAGCTTGATATCGGCTTGTTCTGGTGTTAATTGGGGAAGAACAAGTATAGCAGTTCATGGTGTTATCAAGAGAATGGGATACAATAATGAGCAACAAATTCAAACTGCTCTGATTGGTATGTATACAAGTGGTGACTTCATCAGAGAGGCTTATGATGTCTTTGACGAAATGCGTGTCAAGGATGTGGTTGCTTGGACAATGATGTTAGAAGGCTTCTCATCTGGTCAGTATTGGAGCATGGCTTGTAAACATTTTAATGAGATGATGAAGGTGAATTATATGACTCTTGATTCGACTGCCGTTGTGAGCATCCTTTCGAGTTGTAGCTGCTCGGGAGCTTTGCAGCAAGGTAGACTAGTTCATGCACTGGTACTGAAACAAGGCTTTAGTCATGATGTTTATGTGGGATCTGCAATGATAGACATGAATGCAAAGTCTGGTGATTTGGAAAGTGCATGGAAGTATTTCGACAACATGGAGGTTAAGGATGTTACCTGTTGGAATGCCATGATTGGAGCTGTGGGAGTGAATGGAAATGGTGACAATGCCATTGAGCTCCTATCGAGAATGCAAGACTTAGGATACAAACCAAATGAATCTACTCTTGTATCAGTTTTGTCTGCATGTAGTAATGCTGGTAAGGTTTATGAAGGGCTTCAGATTTTCAATGACATGGCTGAGAGATGGGATCTTATTCCTAGTTTGCAACATTATGCTTGTATAGTTGACCTTCTAAGTCGTTCAGGACGATTTGAAGAGGCCAATTTTGTGATAGCTAAGATGCCTTTGAAGCCTTATTCTGGGATTTATGGTGCTTTACTGGCCGCGTGTAGAAACTATGGCAACACAAGGATAGGAGCTGAGATTTTCCAACAACTGCTTGCGTTAGATAGAGTAAATGTTGGACACTTCTGCTCTGTCTCAAACATGTATGCGTCTTTGGGAAATTGGGAAGGCATAGAGACATATCATTCAGTTCTAAAAGCTAAAGAAATGACCAAACACCCTGGCTTCAGTTTTATTGAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129506.p1 GENE.R_Transcript_129506~~R_Transcript_129506.p1 ORF type:complete len:459 (+),score=77.25,PPR_2|PF13041.2|68,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|4e-13,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|0.00048,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.1e+02,PPR|PF01535.16|4.3,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.013,PPR|PF01535.16|0.23,PPR|PF01535.16|0.0047,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.028,PPR|PF01535.16|6.2,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.1e+03,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|5.4e+03,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|1,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.89,PPR_3|PF13812.2|7.3,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|4.9e+02,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|5.6e+02,PPR_1|PF12854.3|9.1e-06,PPR_1|PF12854.3|7.2,PPR_1|PF12854.3|14,PPR_1|PF12854.3|3e+02,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|0.59,PPR_1|PF12854.3|36,PPR_1|PF12854.3|42 R_Transcript_129506:419-1795(+)
MAVSGLLPNEVTISSILPTFANLGFKKTGKSVHCFWIRQVFGHNVVVENCFVDLYSHFGYMGIARYLFDKMPVRNLVSWNVIISGYANNGMGSDAMELFNLMRSNGVCPDYYTFMSLISACSGVNWGRTSIAVHGVIKRMGYNNEQQIQTALIGMYTSGDFIREAYDVFDEMRVKDVVAWTMMLEGFSSGQYWSMACKHFNEMMKVNYMTLDSTAVVSILSSCSCSGALQQGRLVHALVLKQGFSHDVYVGSAMIDMNAKSGDLESAWKYFDNMEVKDVTCWNAMIGAVGVNGNGDNAIELLSRMQDLGYKPNESTLVSVLSACSNAGKVYEGLQIFNDMAERWDLIPSLQHYACIVDLLSRSGRFEEANFVIAKMPLKPYSGIYGALLAACRNYGNTRIGAEIFQQLLALDRVNVGHFCSVSNMYASLGNWEGIETYHSVLKAKEMTKHPGFSFIEN*

Click here to download the sequence:
Link to NCBI Protein BLAST