Transcript Information: R_Transcript_1296.p1


Annotated TAIR IDAT5G40450.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16184799-16195513 | Reverse length=2889
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7726016640079
Replicate 21.0631038185467
Replicate 31.7397522224926
Condition 2: 8 Hour
Replicate 11.0848168014602
Replicate 21.2737211175359
Replicate 32.5274394534716
Condition 3: 24 Hour
Replicate 12.179538660858
Replicate 21.9542634460005
Replicate 32.770595529987


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1296.p1 GENE.R_Transcript_1296~~R_Transcript_1296.p1 ORF type:internal len:158 (+),score=58.84 R_Transcript_1296:3-473(+)
AGTAAGAAGTTGCCTTCTATACAGGAAGATGAACAAGATGAGGCTAGTCAAGTTGATCAAGTGGTTGCGAAAAGCTCGGGTTACGAGGATTCGCAAACTCCGGTTTTCATGGTTGAGGAGAAGAGTTCACCAGTTTTGCAGGATGAGAAACAGAAGGATTCAGAAATTTCTTCACAAGTTCAGGAAGATGAAGACAAGATTGAAGAAAATTCAGAAACTTTACAGTCTTGCAATGAGGTGAAGAATGAGATAGAGAATGTAGAGATTTCACAAGGGCAAGAAGAAATTCTTGAAGCTCAACATAAAAAAGAAGAAGAAAATGAAGTTATAAAGCCAGCTGATACAACTTCAACTCCTTCAGAATCTCTAGAAGAGGCTACTGTATCTCAGTTAAGGAGTGATGAAAGAAATGAGGATGAAACAGGTAATATATTAATAATTCAAGAGGAAGAATCTCCTGCACCTTGCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1296.p1 GENE.R_Transcript_1296~~R_Transcript_1296.p1 ORF type:internal len:158 (+),score=58.84 R_Transcript_1296:3-473(+)
SKKLPSIQEDEQDEASQVDQVVAKSSGYEDSQTPVFMVEEKSSPVLQDEKQKDSEISSQVQEDEDKIEENSETLQSCNEVKNEIENVEISQGQEEILEAQHKKEEENEVIKPADTTSTPSESLEEATVSQLRSDERNEDETGNILIIQEEESPAPCK

Click here to download the sequence:
Link to NCBI Protein BLAST