Transcript Information: R_Transcript_129827.p1


Annotated TAIR IDAT2G07050.1
Annotated Gene Namecycloartenol synthase 1
Annotated Gene Symbol(s)CAS1
Annotation TypeOrtholog
Chromosome Positionchr2:2924629-2930295 | Forward length=759
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.048160846846224
Replicate 20.055399209541684
Replicate 30.15109985221736
Condition 2: 8 Hour
Replicate 10.90449105346025
Replicate 21.0029947000004
Replicate 32.1552044272227
Condition 3: 24 Hour
Replicate 10.48459751404125
Replicate 20.20367653329029
Replicate 30.31763159835867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129827.p1 GENE.R_Transcript_129827~~R_Transcript_129827.p1 ORF type:complete len:758 (+),score=114.77,SQHop_cyclase_C|PF13243.2|0.027,SQHop_cyclase_C|PF13243.2|1e-53,SQHop_cyclase_N|PF13249.2|1.5e-41,SQHop_cyclase_N|PF13249.2|4.7e+02,SQHop_cyclase_N|PF13249.2|53,SQHop_cyclase_N|PF13249.2|0.052,Prenyltrans|PF00432.17|2.1e-10,Prenyltrans|PF00432.17|9.6e+03,Prenyltrans|PF00432.17|4.6e+02,Prenyltrans|PF00432.17|3.8e-11,Prenyltrans|PF00432.17|1.7e-11,Prenyltrans|PF00432.17|8.2e+02 R_Transcript_129827:197-2470(+)
ATGTGGAGGCTGAAAATAGCAGAAGGCAGTGAGGATAGATGGGTGGTGAGTGTAAACAACCACATCGGACGGCAGCACTGGGAGTTCGATCCCGAGGCCGGAACACCGGAGGAACGAGCTCAGGTTGAGAGCTTCAGGGAGGAGTTTAAGAAGAACCGGTTCAAGATGAAGCAAAGTGCTGATCTCCTCATGAGAATGCAGCTGAGGAAAGAGAAGCCAGCTTTGGGAATGCCTGAAGCAATAAAATTGGGAGATAGAGAAGAAATAACAAGCGAAGCAGTGACCACGACATTGAAGAGAGCTATCAGCTTCTATTCCACAATCCAGGCCCATGATGGCCACTGGCCCGCTGAATCTGCCGGCCCATTATTCTTTCTCCCTCCCCTGGTACTAGCACTATACATCACAGGAGGGTTAAATACCATTTTAAGTCCAGAACACCAGAAAGAGATCAAGCGCTACATATATAATCATCAGAATGAAGATGGAGGATGGGGGCTCCACATAGAAGGCCACAGCACCATGTTTGGTTCAGCACTAAACTACATTGCCTTGAGGTTGCTAGGAGAAGGCCCTCACGACGGTGAACATAATGCCATGGCGAGGGGTCGCCAATGGATACTCGACCATGGCGGTGCTGTGGGCATCCCGTCTTGGGGAAAGTTTTGGCTTACGGTCCTAGGAGTGTATGATTGGGATGGGTGTAACCCTATGCCCCCAGAATTTTGGCTACTTCCTAAAATCTCACCTATACATCCAGGAAAAATGTTATGCTACTGCAGGCTGGTGTATATGCCAATGTCATACCTCTATGGCAAGAGGTTTGTCGGTCCAATCACTGAACTGATTCAGTCACTGAGAAAGGAGCTCTACACTCAACCTTACCATGAGATAAACTGGAACACAGCCAGAAATACATGTGCAAAGGAGGATCTTTACTATCCTCATCCCCTGGCGCAAGACATGCTCTGGGGATTCCTACACCACTTTGCAGAACCAGTTCTCAAGCGCTGGCCCTTCTCAAAGCTGCGAAACAAGGCAATGAAAATCGCAATGGAGCATGTACATTACGAGGACAAAAACAGCAGATACCTTTGCATCGGATGTGTGGAAAAGGTCCTCTGCTTGATTGCCTGTTGGGCAGAAGACCCGAATTCAGAAGCATACAACAGACATCTAGCCAGAATCCCAGATTACTTCTGGCTTGCAGAGGACGGGATGAAGATGCAGAGTTTTGGTTGCCAAATGTGGGATGCAGCCTTTGCAATACAAGCAATCTTTGCAAGTGGTCTCACAGAAGAGTATGCACCAACACTTAAAAAAGCGCATGATTTTGTGAAAGCCTCACAGGTCAGGGATAACCCATCTGGAAACTTCAGAGAGATGTATAGGCACATATCTAAAGGTGCCTGGACTTTCTCGATGCAAGATCATGGCTGGCAAGTCTCTGACTGCACTGCAGAAGGGCTCAAGACTGCACTTCTATTCTCACAAATGTCCACAGAAATTGTGGGGCCACAAATTGAAGCAGACAATTTGTATGATGCTGTAAATGTCATCCTTTCTTTGCAGAGTGAAAATGGTGGTTTCCCAGCCTGGGAGCCCCAGAGAGCATTTCGTTGGATGGAGAAATTCAATCCAACGGAATTCTTTGAAGATGTATTGATTGAAAGAGAGTACGTTGAGTGCACTTCCTCAGCAATTCAAGGCCTAGTGCTCTTTAAGAAGTTTTACCCAGGATATCGGAGGAAAGAAATTGAAAGTTGCATCTCTAAGGGGCTACAATATATTGAAGAGGCTCAGAATCCTGACGGTTCCTGGTTTGGTTGTTGGGGGATCTGTTTCACTTACGGAACATGGTTTGCAGTGGAGGCACTGGCAGCTTGTGGCAAGAACTACCATAACAGCCCTGCACTGCGCAAGGCTTGTAAGTTCTTGCTATCCAAGCAGCTGCCTGATGGTGGATGGGGAGAAAGTTACCTCTCTAGCACAAACAAGGTTTACACAAACTTAGAGGGAAACAGGTCAAATTTGGTGAACACTTCGTGGGCTTTGTTGGCTCTTATAAAGGCTGGACAGGCAGACCTGGACCCAACCCCCATCGAATGTGGGGTGAGAATACTAATCAACTCGCAGATGGAGGATGGGGACTTTCCGCAACAGGAAATCACAGGAGTATTCATGAAGAATTGCACCTTAAATTACTCATCATACCGGAACATCTTCCCCATATGGGCTCTGGGAGAATATAGTTGTTTACAAGCAAGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129827.p1 GENE.R_Transcript_129827~~R_Transcript_129827.p1 ORF type:complete len:758 (+),score=114.77,SQHop_cyclase_C|PF13243.2|0.027,SQHop_cyclase_C|PF13243.2|1e-53,SQHop_cyclase_N|PF13249.2|1.5e-41,SQHop_cyclase_N|PF13249.2|4.7e+02,SQHop_cyclase_N|PF13249.2|53,SQHop_cyclase_N|PF13249.2|0.052,Prenyltrans|PF00432.17|2.1e-10,Prenyltrans|PF00432.17|9.6e+03,Prenyltrans|PF00432.17|4.6e+02,Prenyltrans|PF00432.17|3.8e-11,Prenyltrans|PF00432.17|1.7e-11,Prenyltrans|PF00432.17|8.2e+02 R_Transcript_129827:197-2470(+)
MWRLKIAEGSEDRWVVSVNNHIGRQHWEFDPEAGTPEERAQVESFREEFKKNRFKMKQSADLLMRMQLRKEKPALGMPEAIKLGDREEITSEAVTTTLKRAISFYSTIQAHDGHWPAESAGPLFFLPPLVLALYITGGLNTILSPEHQKEIKRYIYNHQNEDGGWGLHIEGHSTMFGSALNYIALRLLGEGPHDGEHNAMARGRQWILDHGGAVGIPSWGKFWLTVLGVYDWDGCNPMPPEFWLLPKISPIHPGKMLCYCRLVYMPMSYLYGKRFVGPITELIQSLRKELYTQPYHEINWNTARNTCAKEDLYYPHPLAQDMLWGFLHHFAEPVLKRWPFSKLRNKAMKIAMEHVHYEDKNSRYLCIGCVEKVLCLIACWAEDPNSEAYNRHLARIPDYFWLAEDGMKMQSFGCQMWDAAFAIQAIFASGLTEEYAPTLKKAHDFVKASQVRDNPSGNFREMYRHISKGAWTFSMQDHGWQVSDCTAEGLKTALLFSQMSTEIVGPQIEADNLYDAVNVILSLQSENGGFPAWEPQRAFRWMEKFNPTEFFEDVLIEREYVECTSSAIQGLVLFKKFYPGYRRKEIESCISKGLQYIEEAQNPDGSWFGCWGICFTYGTWFAVEALAACGKNYHNSPALRKACKFLLSKQLPDGGWGESYLSSTNKVYTNLEGNRSNLVNTSWALLALIKAGQADLDPTPIECGVRILINSQMEDGDFPQQEITGVFMKNCTLNYSSYRNIFPIWALGEYSCLQARR*

Click here to download the sequence:
Link to NCBI Protein BLAST