Transcript Information: R_Transcript_129854.p1


Annotated TAIR IDAT4G20780.1
Annotated Gene Namecalmodulin like 42
Annotated Gene Symbol(s)CML42
Annotation TypeHomolog
Chromosome Positionchr4:11133309-11133884 | Reverse length=191
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 171.821433321828
Replicate 294.71157253004
Replicate 389.261580741529
Condition 2: 8 Hour
Replicate 150.435558777206
Replicate 286.405364071103
Replicate 385.430949985082
Condition 3: 24 Hour
Replicate 150.78167142215
Replicate 266.405507746629
Replicate 334.259016031665


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129854.p1 GENE.R_Transcript_129854~~R_Transcript_129854.p1 ORF type:complete len:184 (+),score=54.57,EF-hand_1|PF00036.28|2.2e+02,EF-hand_1|PF00036.28|3.2e-06,EF-hand_1|PF00036.28|1.7e-05,EF-hand_6|PF13405.2|2.2e+03,EF-hand_6|PF13405.2|6.1e-07,EF-hand_6|PF13405.2|1.1,EF-hand_7|PF13499.2|9.2e+02,EF-hand_7|PF13499.2|2e-09,EF-hand_5|PF13202.2|6.4e+02,EF-hand_5|PF13202.2|2.4e-05,EF-hand_5|PF13202.2|0.005,EF-hand_8|PF13833.2|89,EF-hand_8|PF13833.2|3.1,EF-hand_8|PF13833.2|0.0013 R_Transcript_129854:182-733(+)
ATGTTAGGCATTCGTAAGCTTTACCACTTGCTCATGGGAAATGTTGTTCATTCCTTAGGTGTAGTCCCTCATTCAACCACACCAAGCTCTATTTCCACTCCTACCCTCTCAAAACCTACCAAACTCAATGTAGATCAAGCCCATGACACAAGGGCAAAAGCGTTAATAACGGTGTTTGGCATGGGTAAGGATGGAAAAATAGGCAAGGAAAAAGCATGTAATGTGGTGAAAAGCTTAGGTTTGGTTAAGGAAGATGATGAAGAGTCCTTGAGCTTCGACGATATAGCTGAGGAGGAGCTCATTAAGACCGTAGAGCTCGAGCAGGAGGAGGAGAAAAGAGAGAGAGAACAACTTCTTCGACGAGCTTTCATGGTGTTTGATGAAGATGGTGATGGTTTTATTGATGCTAGGGAGATTAAGAGGGTGTTGGTTTGTCTTGGATTGGATAATGGTTGGGATTTGAGTGAGATTGAGAATATGATTAAGGTGGTTGATTTGAACCTTGATGGTAAGGTTGATTTTCATGAGTTTGAGTTGATGATGGGTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129854.p1 GENE.R_Transcript_129854~~R_Transcript_129854.p1 ORF type:complete len:184 (+),score=54.57,EF-hand_1|PF00036.28|2.2e+02,EF-hand_1|PF00036.28|3.2e-06,EF-hand_1|PF00036.28|1.7e-05,EF-hand_6|PF13405.2|2.2e+03,EF-hand_6|PF13405.2|6.1e-07,EF-hand_6|PF13405.2|1.1,EF-hand_7|PF13499.2|9.2e+02,EF-hand_7|PF13499.2|2e-09,EF-hand_5|PF13202.2|6.4e+02,EF-hand_5|PF13202.2|2.4e-05,EF-hand_5|PF13202.2|0.005,EF-hand_8|PF13833.2|89,EF-hand_8|PF13833.2|3.1,EF-hand_8|PF13833.2|0.0013 R_Transcript_129854:182-733(+)
MLGIRKLYHLLMGNVVHSLGVVPHSTTPSSISTPTLSKPTKLNVDQAHDTRAKALITVFGMGKDGKIGKEKACNVVKSLGLVKEDDEESLSFDDIAEEELIKTVELEQEEEKREREQLLRRAFMVFDEDGDGFIDAREIKRVLVCLGLDNGWDLSEIENMIKVVDLNLDGKVDFHEFELMMGS*

Click here to download the sequence:
Link to NCBI Protein BLAST