Transcript Information: R_Transcript_129874.p1


Annotated TAIR IDAT4G28890.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14256437-14257735 | Reverse length=432
E-Value1.5E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8304790347278
Replicate 23.0889189479246
Replicate 32.6868737935845
Condition 2: 8 Hour
Replicate 11.5090692114604
Replicate 22.2227516740741
Replicate 31.6599882475901
Condition 3: 24 Hour
Replicate 11.8713123187592
Replicate 22.148524225921
Replicate 31.8276015841942


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_129874.p1 GENE.R_Transcript_129874~~R_Transcript_129874.p1 ORF type:5prime_partial len:503 (+),score=77.46,zf-RING_2|PF13639.2|1.1e-12,zf-RING_11|PF17123.1|1.7e-10,zf-rbx1|PF12678.3|4.6e-08,zf-C3HC4|PF00097.21|8.3e-07,zf-C3HC4_2|PF13923.2|1.4e-05 R_Transcript_129874:1-1509(+)
TTTTGTTTAAATTTACCAACTCTCAAACTAACTTATCTCCTTCCTTCCTTCCCACAACAAGTACATGACCAACAAAACAAAACCTCTTGCATAATCAATCCAAATTTGTTAACCATGAATAAGTATGTCATGTTTATATTGCTAATTTCGATTTCGCTCCAATTGGTGAAAGCTCAAGATGATGAGAAAAAAGTGCCAACTTCAGCTAATTTCCAACCAAGCTTATTTGTGGTCATAGGTGTTCTGTCTTTCATGTTCTCCATAACATTTGCTCTTCTAATGTACGCCAAGTTCTGCCACCTGCAACCAACGGCCATCCACAGCCTTAACCGCCAAGATAACGACATGTTTGGCAGCAATACAAAATTCTCAGGCCTAGACAAGACAGTAGTTGAATCACTCCCCTTTTTCAGATTTTCTTCCCTTAAAGGATCCAAACAAGGCCTTCAATGCTCAGTTTGCCTAGCTGAGTTTGGTGAATCTGAGGTCCTACGTTTGCTCCCCAAATGTAAACATGGTTTCCACATTGAATGCATTGATGAGTGGCTTGACAATCACTCCACTTGTCCCCTTTGTAGGATCAAAGTCACCCCTCAGGATCTCGACACCTTCATCAACTCGAGCAGTCTTCGGTTAGCAGGGGATCCTGCTACCCCTGGCTCTGCTGTGAACACAAATTTTGAATCATCATCAATCTTCGAGCTCTTCCTGGAACGGGAAGAAGAGCATCGAGAACAAGGTGGTGGAGGATCATCAAAGTTCAGCATCGGAGGGAGCTTCAAGCGGATCCTCAGGGCTAACAAGGAAGACGAAATTCCTATTCAACACGATTGTTATGATCAAGATGACATAGAAGAAGGAAAGATTTTACACAGGCTGAATCATCAGATAATCATCTCGGATGTGGTGTTCAAGAATCGTTGGAGCAATGTGAGCTCATCAGATTTGCTGTTCTTGAATTCGGAAATGTTGGGAGTCATGTCGAGTGGCAGGTTTTCGTCTTCCAATTACTTGATGTCGGATGACAAAAACGGCAACTCTGTGACTTCTTGTTATGTAGATGAGGATGAGCAATACAGGATCATGAACATCAAGGAAGAGATGGAGAGAAAGAGGATGTTTGAGCACAAAATTGGTCTTATTAATCAGAGTTCCGAGGATTTTCGGGAGATTAATATTAGTTTCAGTCCTCCTAGAACAAGTAGCTTGATCCCAGCTGATAAAAGATCAATGTCAGAGATTACAGCTCTTCCAAGGTTTACTGATATGATGAATATGAAGACTAAGCTTAGACAATGTTTACAGGAACCAGATAATGGTAGTAATAATAATGATCATCATAATAATAATAATAATAGTATTGTTCGTGATGATGGTAAGGAGGATATTAAGAGAAGAAGAATTTGGTTTCCAATTGCTAGAAGAACAGTTCAATGGTTTGCAAACAGAGAAAAATACAGGTCACAGCATCAGCAATCTCCGGAATCACACCAGATGTCAGATGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_129874.p1 GENE.R_Transcript_129874~~R_Transcript_129874.p1 ORF type:5prime_partial len:503 (+),score=77.46,zf-RING_2|PF13639.2|1.1e-12,zf-RING_11|PF17123.1|1.7e-10,zf-rbx1|PF12678.3|4.6e-08,zf-C3HC4|PF00097.21|8.3e-07,zf-C3HC4_2|PF13923.2|1.4e-05 R_Transcript_129874:1-1509(+)
FCLNLPTLKLTYLLPSFPQQVHDQQNKTSCIINPNLLTMNKYVMFILLISISLQLVKAQDDEKKVPTSANFQPSLFVVIGVLSFMFSITFALLMYAKFCHLQPTAIHSLNRQDNDMFGSNTKFSGLDKTVVESLPFFRFSSLKGSKQGLQCSVCLAEFGESEVLRLLPKCKHGFHIECIDEWLDNHSTCPLCRIKVTPQDLDTFINSSSLRLAGDPATPGSAVNTNFESSSIFELFLEREEEHREQGGGGSSKFSIGGSFKRILRANKEDEIPIQHDCYDQDDIEEGKILHRLNHQIIISDVVFKNRWSNVSSSDLLFLNSEMLGVMSSGRFSSSNYLMSDDKNGNSVTSCYVDEDEQYRIMNIKEEMERKRMFEHKIGLINQSSEDFREINISFSPPRTSSLIPADKRSMSEITALPRFTDMMNMKTKLRQCLQEPDNGSNNNDHHNNNNNSIVRDDGKEDIKRRRIWFPIARRTVQWFANREKYRSQHQQSPESHQMSDV*

Click here to download the sequence:
Link to NCBI Protein BLAST