Transcript Information: R_Transcript_12998.p1


Annotated TAIR IDAT1G16280.1
Annotated Gene NameRNA helicase 36
Annotated Gene Symbol(s)RH36, AtRH36, SWA3
Annotation TypeOrtholog
Chromosome Positionchr1:5568482-5570487 | Reverse length=491
E-Value5.7E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.76391974431
Replicate 215.149769609321
Replicate 315.783300904666
Condition 2: 8 Hour
Replicate 116.87135816487
Replicate 220.906515542572
Replicate 325.788568747257
Condition 3: 24 Hour
Replicate 119.831439170273
Replicate 217.034549549633
Replicate 321.531807049712


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12998.p1 GENE.R_Transcript_12998~~R_Transcript_12998.p1 ORF type:complete len:492 (+),score=88.91,DEAD|PF00270.25|2.1e-40,DEAD|PF00270.25|3e+03,Helicase_C|PF00271.27|3.2e+02,Helicase_C|PF00271.27|7.7e+03,Helicase_C|PF00271.27|6.3e-27,ResIII|PF04851.11|4.1e-05,ResIII|PF04851.11|2.2e+03 R_Transcript_12998:85-1560(+)
ATGGATGAAGATACTCAACTTGACAAGAGTTTTCCCCTTTTTTCCAAGCGGAAGAAAGTTTCTTCCAAGAAACAGCAACCCACCAGCATCCCCAAAGAAAATAATACCCAGAGCTCAGATGAGCAAGAGAGAGTTGAAAAGGAGAGCCACTCTGGGGCACCCTCCTCTTCTTTTGCTGATTTAGGCCTCTCGGAATGGACTGTCAATACCTGCTCTGAGCTCGGGATGAAAAAACCCACCCCTGTTCAATATTATTGCATTCCGAAAATCCTAGCAGGCCATGACGTGCTTGGCCTGGCTCAAACTGGTAGTGGAAAAACTGCTGCCTTTGCGCTTCCGATTCTTCAGCAGTTGGCCGAGGACCCATATGGGGTTTTTGCCCTTGTTCTTACTCCCACTCGGGAATTGGCTTATCAGTTGGCCGAGCAGTTTCGTGCCCTTGGATCAACACTTCATGTTCGTTGTACCGTTGTTGTTGGAGGCATGGACATGATCACCCAAGCAAAGACACTGTTGCAACGGCCCCATATTGTTATTTCAACTCCGGGAAGAATAAAGGTCCTGCTTGAACAGAACCCAGATATTCCTCCAGTATTTGCGAGAACTAAGTTTCTCGTACTGGACGAAGCAGATAGAGTACTCGATGTTGGATTTGAGGAGCTGAGAGTAATATTTCGGTGCTTGCCCAAAAAAAGACAAACTTTATTATTTTCAGCGACAATGACCAGTGACCTACAAATGTTACTTGAGCTTTCTGCAAACAAAGCCTACTTTTATGAGGCTTACGAAGGCTTTAAGACTGTGGAATCTCTTAGACAACAGTATCTTTTTATTCCCAAAAATGTTAAGGATGTCTATCTTCTGCATCTCTTGTCAAAGATGGAAGACATGGGAGTGCGGTCAGCCATTATATTCGTCTCTAGATGCAGAACATGTCACCTTTTGAATTTGTTGTTAGAAGAGCTTGATCAAGATGTGGCAGCACTACACTCAATGAAATCGCAGTCCTTAAGACTTGCTGCTTTACACCAATTCAAATCTGGTCAGGTTCCAGTTTTGCTTGCGACAGATGTTGCCAGTCGTGGGCTAGATATCCCAACTGTGGATCTTGTTATAAATTATGATATACCAAGGTATCCTAGAGATTATGTTCATCGTGTGGGACGTACTGCAAGAGCAGGAAGAGGAGGGCTTGCAGTGAGCATTGTTACACAGAATGATGTGGAGCTGGTACATGGAATAGAAGCAGAACTTGGGAAGCAACTTGAAGAATTTGAATGTAAAGAAAAAGAGGTTCTTGCCGACATCACAAAGGTTTACAAAGCAAGACGAGTTGCAACAATGAAGTTGTTGGATGACGGCTTTGAGGATCAAGTGAAACAACGCCAAAAACAGAAACAGAAAACACTAGTAGAGAAAGGACGGTTGAATAAGAAGTTACGAAAACGGAAGAAAACAAAGGAAACGGAAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12998.p1 GENE.R_Transcript_12998~~R_Transcript_12998.p1 ORF type:complete len:492 (+),score=88.91,DEAD|PF00270.25|2.1e-40,DEAD|PF00270.25|3e+03,Helicase_C|PF00271.27|3.2e+02,Helicase_C|PF00271.27|7.7e+03,Helicase_C|PF00271.27|6.3e-27,ResIII|PF04851.11|4.1e-05,ResIII|PF04851.11|2.2e+03 R_Transcript_12998:85-1560(+)
MDEDTQLDKSFPLFSKRKKVSSKKQQPTSIPKENNTQSSDEQERVEKESHSGAPSSSFADLGLSEWTVNTCSELGMKKPTPVQYYCIPKILAGHDVLGLAQTGSGKTAAFALPILQQLAEDPYGVFALVLTPTRELAYQLAEQFRALGSTLHVRCTVVVGGMDMITQAKTLLQRPHIVISTPGRIKVLLEQNPDIPPVFARTKFLVLDEADRVLDVGFEELRVIFRCLPKKRQTLLFSATMTSDLQMLLELSANKAYFYEAYEGFKTVESLRQQYLFIPKNVKDVYLLHLLSKMEDMGVRSAIIFVSRCRTCHLLNLLLEELDQDVAALHSMKSQSLRLAALHQFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAVSIVTQNDVELVHGIEAELGKQLEEFECKEKEVLADITKVYKARRVATMKLLDDGFEDQVKQRQKQKQKTLVEKGRLNKKLRKRKKTKETEA*

Click here to download the sequence:
Link to NCBI Protein BLAST