Transcript Information: R_Transcript_130029.p1


Annotated TAIR IDAT3G13170.1
Annotated Gene NameSpo11/DNA topoisomerase VI, subunit A protein
Annotated Gene Symbol(s)ATSPO11-1
Annotation TypeOrtholog
Chromosome Positionchr3:4231560-4234192 | Reverse length=362
E-Value1.2E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54758882864156
Replicate 20.73487051457043
Replicate 30.11453368798076
Condition 2: 8 Hour
Replicate 10
Replicate 21.2298485012652
Replicate 30.99833858412128
Condition 3: 24 Hour
Replicate 10.80352325296964
Replicate 20.88221035562309
Replicate 31.3132622812138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130029.p1 GENE.R_Transcript_130029~~R_Transcript_130029.p1 ORF type:complete len:200 (+),score=19.40,TP6A_N|PF04406.10|1.5e-22 R_Transcript_130029:27-602(+)
ATGGAGGGAAAGCGTTCAACTCCAAAACCAAGCGATTTGCTTCATAAAATCAAATGTTTTACGAAATCGATTATCGTTGATCTTTGCAATGGACGATCGCCTGTGGTTTCGATTAACAAATTCAGAAATTACTGCTCGGATAATTCTGGAAACTGTTTCTGCAGCCCCAGTTTGCCTGTAGGGAAAGAGATGCTCAGGTTGCAAAGTCTATCTCATGCCTATAGGATTGATGTCTTGCTAAGGGTGTTATTAATTGTTCAGAAGCTTCTACAAGAGAAACGACATGCTTCAAAAAGAGATATATACTATATGCACCCCTCTTTATTTTCTGAGCAGGCTGTTGTAGATCGGGCCATAAATGATATATGTATACTTCTAGGGTGCAGTCGTCACAACCTTAATGTGGTCTCTGTTGGAAAAGGGTTGGTGATGGGCTGGATAAGATTTTTTGAAGATGAAAATAAAATTGATTGCATGGCTAGTCCTAACACAGGACAACCTATTCCTGTGTATGTTGAAGAAGTTCATAGTATCCTGGTTGCATGGACGCGAACATGGACACTGACAAGGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130029.p1 GENE.R_Transcript_130029~~R_Transcript_130029.p1 ORF type:complete len:200 (+),score=19.40,TP6A_N|PF04406.10|1.5e-22 R_Transcript_130029:27-602(+)
MEGKRSTPKPSDLLHKIKCFTKSIIVDLCNGRSPVVSINKFRNYCSDNSGNCFCSPSLPVGKEMLRLQSLSHAYRIDVLLRVLLIVQKLLQEKRHASKRDIYYMHPSLFSEQAVVDRAINDICILLGCSRHNLNVVSVGKGLVMGWIRFFEDENKIDCMASPNTGQPIPVYVEEVHSILVAWTRTWTLTRT*

Click here to download the sequence:
Link to NCBI Protein BLAST