Transcript Information: R_Transcript_130116.p1


Annotated TAIR IDAT4G17750.1
Annotated Gene Nameheat shock factor 1
Annotated Gene Symbol(s)HSF1, HSFA1A, ATHSF1, ATHSFA1A
Annotation TypeOrtholog
Chromosome Positionchr4:9869969-9871603 | Reverse length=495
E-Value1.2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0980414890481
Replicate 20.72401035918269
Replicate 33.2911979304817
Condition 2: 8 Hour
Replicate 12.9551905970813
Replicate 24.2408569009145
Replicate 31.6691136202655
Condition 3: 24 Hour
Replicate 13.166594100373
Replicate 23.802630843203
Replicate 31.0063312499723


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130116.p1 GENE.R_Transcript_130116~~R_Transcript_130116.p1 ORF type:5prime_partial len:174 (+),score=7.23 R_Transcript_130116:3-524(+)
ATTCTATCCCCCGAGGATCAGCATAATAACAACAACAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACGCATTATAGTACTCAGGATTTTTCTCTCTCTAGTACCAATGATGATGACTCCTTAATTTCCGAAGAGCAGGTTTGGTCATCTTATTATAACACTAATAATAACAATAATAGTAGTGTTACGAATATTAATAATGGTCAATGTTATTATATGAGCAATAATAATGATGACGTGGAGCTGCCACCTTTGCCGGATCAATACACAGGAGAAGTTGGTCAAAGTTCATGGTCCGACCCGTTTTGCGGATATGGGTCTTCGGTTACGGGTTTTGACCCCATTGTTTCAAGTGGTACGTCGTCGTATTTGGGCTTTGACTCAAGTTCCGGGTACGTGCATAGCCCCTTGTTTAGCTCAATGCCTCCGGTTCCCACTTCTGAAAATGGGCTTGACCCGTTTTCTCTCGGGTCTTCCTCTTATTTCTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130116.p1 GENE.R_Transcript_130116~~R_Transcript_130116.p1 ORF type:5prime_partial len:174 (+),score=7.23 R_Transcript_130116:3-524(+)
ILSPEDQHNNNNNNNNNNNNNNNNNNNNNNNNTHYSTQDFSLSSTNDDDSLISEEQVWSSYYNTNNNNNSSVTNINNGQCYYMSNNNDDVELPPLPDQYTGEVGQSSWSDPFCGYGSSVTGFDPIVSSGTSSYLGFDSSSGYVHSPLFSSMPPVPTSENGLDPFSLGSSSYFY*

Click here to download the sequence:
Link to NCBI Protein BLAST