Transcript Information: R_Transcript_130126.p1


Annotated TAIR IDAT1G71060.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26805651-26807183 | Reverse length=510
E-Value1.2E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9804297600056
Replicate 21.1770077991053
Replicate 32.0297109262414
Condition 2: 8 Hour
Replicate 11.1069559198574
Replicate 21.6578592323483
Replicate 32.2976722304287
Condition 3: 24 Hour
Replicate 12.4909013266948
Replicate 21.9941463734699
Replicate 32.3747961685603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130126.p1 GENE.R_Transcript_130126~~R_Transcript_130126.p1 ORF type:complete len:553 (+),score=87.46,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|8.2e-06,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|3.5e-10,PPR_2|PF13041.2|0.0036,PPR_2|PF13041.2|7.9e-08,PPR_1|PF12854.3|13,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|1.9e-06,PPR_1|PF12854.3|2.4e-05,PPR|PF01535.16|0.087,PPR|PF01535.16|30,PPR|PF01535.16|0.062,PPR|PF01535.16|0.024,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|0.052,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|0.028,PPR|PF01535.16|0.014,PPR|PF01535.16|3.4e-05,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|0.0013,ATP13|PF12921.3|7.7e+02,ATP13|PF12921.3|0.38,ATP13|PF12921.3|11,ATP13|PF12921.3|9.7 R_Transcript_130126:28-1686(+)
ATGGGTTCATCTAAGATACGAACCCATGTATTGAAAACACCAGCAAAATGCATTGCTTCTTGTGTCCTTCCTCTGCTTCAAACTCTTTCCTATTCAACTTCACCCTTGCAAAACCAATTCCCTTTCAAGAAACATCTGATTGAAGGAAATTTATCATCTTGTATTTCACCAAAAAAGCTATGTTCTTGCCCATTTCCAACGACAGTGGCTGCAATACATCATGGAACTATGATGAATACCTACTTTTTAGAAGAAACAGAGGAACAAAATTCACCAAATTTCATCACCAACCAATTAGTCAAAGATTCAGATGAAATCTGTTCATTATTGTCAACTTTACCCAAAAACTCCAGCATTGAATCTGTTCTTGAAAAATGTGGAATAGAGGTCACTCCCATCTTGGTTTTGGAGGTTCTAAAGAAGCTAAGCAATGCAGGGTTTCTAGCTATAGATTTTTTCAAATGGGCAGAACAGCAACAGGGGTTCAGATACACAACAGAGAGTTACAATGCCTTGATTGATTCTTTAGGTAAAATCAAACAATTCAAAATGATTTGGGTATTGGTTAGTTCTATGAGAAGTAAAGAACTATTGAGTAAAGATACAATCTTTTTAATTATAAGAAGGTATGCCAGGCCGAGGAGAGTTGAAGATGCAATTGAGACATTTGAGAAGATAGAGCAGCTGGGTATGAAGCTTGATTTGTCAGATTTCAATAGGTTTCTTGACACATTGTGTAAATCCAGACAAGTTGCGAAAGCGCACCAGATGTTTGATAAAATGACAAAGAGAAGATTTAAGCCTGATAAGAAGTCTTATACTATACTCTTGGAAGGGTTTGGTCAACAGCAGAATTTACTGAAGTTAGATGAAGTATACCGAGAGATGAAAGATGAGGGATTTGAGCCTGATGTTGTAGCTTATGGGATTATAATGAATGCATATTGTAAGGCGAGGAAGGTTGATCGAGCATTGGAGATGTTTCGAGAAATGGAAGCAACGAACATTGAACCTTCTCAGCATATTTATTGTATTCTGATTAATGGGTTAGGTTCTTATAAGAGATTGAATGAAGCCCTGAAGTTTTTCGAGTTGTCAAAAGCTAGTGGTACTGCTCCTGAGATAGCAACGTACAATGCAGTGGTTGGATCATATTGTTGGTCGATGAAATTTGATGAAGCATTTCAGTTAGTTGATGAAATGAGAAGATGTAGGGTTGGTCCTAATTCAAGAACGTATGACATAATTCTTCATCACTTGATAAGGGCAGGAAAAATCACAGAAGCTTATTCAGTTTTCGAGAGGATGAGCAACAAGCAAGGTTGTGAACCGACTGTGAGCACATACGAGATTATAGTTAGAATGTTCTGCAATATTAGACAAATGAGTAGGGCAGTACAAGTATGGGATCAGATGAAGGCTAAGGGTATTCTTCCTGGAATGCATATGTTTGCAACATTGATCAACTGCTTTTGCCATGAAAATAAGCTGGAAGGTGCTTGCAAATATTTCAATGAAATGCTGGATTTGGGGCTTAGACCTCCAGGTTCTACATTTAGCAATCTTAAACGAGCTCTTCTTGATGAAGGGAGGAAGGAAACTGTTATAGTTTTGACTCGGAAACTTGAGGCAATAAGGACTACTACGGTTATTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130126.p1 GENE.R_Transcript_130126~~R_Transcript_130126.p1 ORF type:complete len:553 (+),score=87.46,PPR_2|PF13041.2|0.022,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|8.2e-06,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|0.09,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|3.5e-10,PPR_2|PF13041.2|0.0036,PPR_2|PF13041.2|7.9e-08,PPR_1|PF12854.3|13,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.4e-11,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|2.4e-06,PPR_1|PF12854.3|0.0038,PPR_1|PF12854.3|1.9e-06,PPR_1|PF12854.3|2.4e-05,PPR|PF01535.16|0.087,PPR|PF01535.16|30,PPR|PF01535.16|0.062,PPR|PF01535.16|0.024,PPR|PF01535.16|3.4e-07,PPR|PF01535.16|0.052,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|0.028,PPR|PF01535.16|0.014,PPR|PF01535.16|3.4e-05,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|0.0053,PPR_3|PF13812.2|0.0013,ATP13|PF12921.3|7.7e+02,ATP13|PF12921.3|0.38,ATP13|PF12921.3|11,ATP13|PF12921.3|9.7 R_Transcript_130126:28-1686(+)
MGSSKIRTHVLKTPAKCIASCVLPLLQTLSYSTSPLQNQFPFKKHLIEGNLSSCISPKKLCSCPFPTTVAAIHHGTMMNTYFLEETEEQNSPNFITNQLVKDSDEICSLLSTLPKNSSIESVLEKCGIEVTPILVLEVLKKLSNAGFLAIDFFKWAEQQQGFRYTTESYNALIDSLGKIKQFKMIWVLVSSMRSKELLSKDTIFLIIRRYARPRRVEDAIETFEKIEQLGMKLDLSDFNRFLDTLCKSRQVAKAHQMFDKMTKRRFKPDKKSYTILLEGFGQQQNLLKLDEVYREMKDEGFEPDVVAYGIIMNAYCKARKVDRALEMFREMEATNIEPSQHIYCILINGLGSYKRLNEALKFFELSKASGTAPEIATYNAVVGSYCWSMKFDEAFQLVDEMRRCRVGPNSRTYDIILHHLIRAGKITEAYSVFERMSNKQGCEPTVSTYEIIVRMFCNIRQMSRAVQVWDQMKAKGILPGMHMFATLINCFCHENKLEGACKYFNEMLDLGLRPPGSTFSNLKRALLDEGRKETVIVLTRKLEAIRTTTVIG*

Click here to download the sequence:
Link to NCBI Protein BLAST