Transcript Information: R_Transcript_130371.p1


Annotated TAIR IDAT4G39830.1
Annotated Gene NameCupredoxin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18479103-18481184 | Forward length=582
E-Value1.6E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70542844269444
Replicate 20.45644131339778
Replicate 30.55330284048677
Condition 2: 8 Hour
Replicate 10.94631362114957
Replicate 21.7283773403815
Replicate 33.7706244283896
Condition 3: 24 Hour
Replicate 11.0536191722859
Replicate 20.58600929419408
Replicate 30.68729507470934


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130371.p1 GENE.R_Transcript_130371~~R_Transcript_130371.p1 ORF type:5prime_partial len:414 (+),score=40.33,Cu-oxidase|PF00394.18|1.3e-43,Cu-oxidase_2|PF07731.10|1.5e+03,Cu-oxidase_2|PF07731.10|5.1e+03,Cu-oxidase_2|PF07731.10|1.2e-37 R_Transcript_130371:2-1243(+)
ACTGATTGGTATCACAAGAGCACCTATGAACATGCCACCGGCTTGGCTTCCATACCCTTTGTCTGGGTTGGCGAGCCTCAGTCACTTCTAATACAAGGGCGAGGCAAGTACAACTGCTCATTGGTCAATGCCCCTAGTTCTGATGCTGGGACCTGTAACTCCACAAGTCTTGATTGTATGCCTTTTGTCTTAACTGCTGTTCCTGGTAAAACCTATCGTCTTCGCGTTGGTAGCTTGACATCCTTGTCTGCTCTCAGCTTTGCTATTGAGGGTCATAAGATGACGGTGGTTGAAGCCGATGGGCACTTTGTAGAGCCATTTGAAGTGGATAACCTCTTCATCTACTCTGGCGAGACCTACTCAGTGTTAGTGACAGCCAACCAAGACCCTTCAAGGAAATACTGGACTACTGTCAACGTTGTGAGCCGCAAGCCTGGCACCCCAACCGGCCTTGCCATCTTCAACTATTACCCCAACCGTCCTGAGCAGAACCCGCCCACAGTTCCCTCCACAGGACCCATGTGGAACGATACCAAGCCAAGGGTAGCCCAGAGTCTAGCCCTCAAGGCCAGGCAAGGGTTCATCGAGGCACCACCAGCTCGGTCAGACAGGCTCCTGGTGTTCCTCAACACTCAGAACAGGATAAACGGCAATGTGCGCTGGTCCATTAACAATGTCTCCTTGTCACTCCCATCCACCCCTTACCTAGTTGCACTCAAGGAGAGGAAGCTCAGCAACAAGCTACACCGCATGTTTGACCAACGTCCCCCTCCAGATAGCTACGACTGGCAAAACTACGACATCCACAGCGTGGCTGCTAATGTCAATGCTACTTCCAGCAATGCAATTTACAGGTTGGGATTCAACACAGTAGTAGATGTTGTGTTACAGAACGCAAACACAATGAACCCAAACAACAGTGAGACACACCCTTGGCACTTGCACGGTCATGATTTCTGGGTGCTGGGATATGGGGAGGGTAAGTTTGACCCCTTCAAGGACCCCCAGAAGTTCAACTTGGTCAATCCCATTGAGAAAAATACGGTGCCAGTTCATCCATACGGGTGGACCGCCCTCAGGTTTCGGGCTAATAATCCGGGTGTTTGGCTATTCCACTGTCACATAGATTCACACTTCTTTATGGGAATGGGGGTTGTTTTTGAGGAAGGTATTGACAGAGTTGGCGAGTTGCCTTCGTCCATCATGGGATGTGGACTAACCAGACGCCTCATTTCTCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130371.p1 GENE.R_Transcript_130371~~R_Transcript_130371.p1 ORF type:5prime_partial len:414 (+),score=40.33,Cu-oxidase|PF00394.18|1.3e-43,Cu-oxidase_2|PF07731.10|1.5e+03,Cu-oxidase_2|PF07731.10|5.1e+03,Cu-oxidase_2|PF07731.10|1.2e-37 R_Transcript_130371:2-1243(+)
TDWYHKSTYEHATGLASIPFVWVGEPQSLLIQGRGKYNCSLVNAPSSDAGTCNSTSLDCMPFVLTAVPGKTYRLRVGSLTSLSALSFAIEGHKMTVVEADGHFVEPFEVDNLFIYSGETYSVLVTANQDPSRKYWTTVNVVSRKPGTPTGLAIFNYYPNRPEQNPPTVPSTGPMWNDTKPRVAQSLALKARQGFIEAPPARSDRLLVFLNTQNRINGNVRWSINNVSLSLPSTPYLVALKERKLSNKLHRMFDQRPPPDSYDWQNYDIHSVAANVNATSSNAIYRLGFNTVVDVVLQNANTMNPNNSETHPWHLHGHDFWVLGYGEGKFDPFKDPQKFNLVNPIEKNTVPVHPYGWTALRFRANNPGVWLFHCHIDSHFFMGMGVVFEEGIDRVGELPSSIMGCGLTRRLISP*

Click here to download the sequence:
Link to NCBI Protein BLAST