Transcript Information: R_Transcript_130438.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.498665188697
Replicate 22.4357657095473
Replicate 32.4979505035247
Condition 2: 8 Hour
Replicate 12.5565288227982
Replicate 22.9572395938459
Replicate 33.3270933619735
Condition 3: 24 Hour
Replicate 11.864323092737
Replicate 21.5351688322908
Replicate 32.84387810317


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130438.p1 GENE.R_Transcript_130438~~R_Transcript_130438.p1 ORF type:5prime_partial len:431 (+),score=81.80,Dimer_Tnp_hAT|PF05699.10|4.5e-09 R_Transcript_130438:3-1295(+)
AGAAATGAAATTGCGAATGACGAAGAGGTTGTAAAAGGGGTGAAAAATGTCATAATCAGATTGGAACCCAATTTAAAAAATCAACTCAAGGCATTAAATCAGTTGCATATATACCGAGATAGGTTGGAAGGTTTTGCATCAATTCAAGCGCAAAAAGGAATGGAATTTTGTGATCTTGATGAGTGGTGGTTGAATTTTGGTGACTCTGTCCCGGAATTGAAACGCATTGCGGTTAAAGTGTTGAGCCAAACAACTTCAGCATCCAATTGTGAAAGAAATTGGAGCATGTGGAGTTTAATTCATACTAAGACCAGAAATCGATTGAAGTATAATAAGCTTCACATGATTGTATATATCAAATACAATAAGAAGTTGAAGGAACGACACTTAAAAAGGAGAAGCCGGGAAGAGCTTAATGAGAGTTATAATCCAATTAATTTGGATTATATTTTTGATGAGAGTGATCCGTTAGAGCCTTGGTTGGGTGAAATTGAGCAACCAGTTTTTGGGGATGAAGATTTTGCTGGTTGGTTGAGCGATGATAATGAAACCAATCAAGATGATGAACCTAGTGGGAGTCATTCTATGGGCCACAATAATGATGATGAGTCGGCCTCTAGTGGTGGGCCTGGCAGTGAAGAAAGGGGTGGAGGCAGTCAAGAGGGGGGTGGCGGCGGATTTGATCATCATGCTTCATATTCTGGGATGGTATATGGAGGTTATCAACATGAAAATGTTGGCACATCATCTGATCAACAACGCCAACCCCGTGAAATGCAACAATTCCGCCGAAGGGGAAAGGAACCACGGAATGAAGAATTACTTGAGAGTGAAAGTGATGCTAATTCTCAGTTTCACACGCCAGAAGCATCTAGTGCTTCAATTAATTTTGAAAATGCATCACCTTACTCTGATTTAGGTGGTTTTCCTTCTTATCCTTATCATGCCATGCCGACATGGAATCCACCTTATGGCGGCCAAAGTTATGCTGGGAGGCCTGGGACTGGCTCTCGATTAACTCGTGAATCCAGTAGTGCAAGTGGTGGTAGCACCCGATCAGATAATGTTCAAATTTTCAATCATGGTAACATTAACTACGGAGATGTACACTATCATCAACCTGTTCACTACGGAGAACCCCCAAGACAACCCACTTTTCATGATAATAATTCATATAGTTCTTCTTGGGTTGGGGATGCTACAACATATTTTTTTGGCCAACCTCCAGCAAGTCATTATGATGGGGATGACAATAATCAACCGGATCCACCTCGTCATTCCTTTTGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130438.p1 GENE.R_Transcript_130438~~R_Transcript_130438.p1 ORF type:5prime_partial len:431 (+),score=81.80,Dimer_Tnp_hAT|PF05699.10|4.5e-09 R_Transcript_130438:3-1295(+)
RNEIANDEEVVKGVKNVIIRLEPNLKNQLKALNQLHIYRDRLEGFASIQAQKGMEFCDLDEWWLNFGDSVPELKRIAVKVLSQTTSASNCERNWSMWSLIHTKTRNRLKYNKLHMIVYIKYNKKLKERHLKRRSREELNESYNPINLDYIFDESDPLEPWLGEIEQPVFGDEDFAGWLSDDNETNQDDEPSGSHSMGHNNDDESASSGGPGSEERGGGSQEGGGGGFDHHASYSGMVYGGYQHENVGTSSDQQRQPREMQQFRRRGKEPRNEELLESESDANSQFHTPEASSASINFENASPYSDLGGFPSYPYHAMPTWNPPYGGQSYAGRPGTGSRLTRESSSASGGSTRSDNVQIFNHGNINYGDVHYHQPVHYGEPPRQPTFHDNNSYSSSWVGDATTYFFGQPPASHYDGDDNNQPDPPRHSFWW*

Click here to download the sequence:
Link to NCBI Protein BLAST