Transcript Information: R_Transcript_130488.p1


Annotated TAIR IDAT1G35710.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:13220940-13224386 | Forward length=1120
E-Value3E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7306062397521
Replicate 25.7349530727369
Replicate 36.569610630763
Condition 2: 8 Hour
Replicate 12.9353313062707
Replicate 22.2055498022414
Replicate 32.0382688708781
Condition 3: 24 Hour
Replicate 18.5351483623483
Replicate 27.4633121890724
Replicate 36.4434214101033


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130488.p1 GENE.R_Transcript_130488~~R_Transcript_130488.p1 ORF type:5prime_partial len:659 (+),score=60.64,LRR_8|PF13855.2|3.3e-05,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|1.6e-06,LRR_8|PF13855.2|2e-10,LRR_8|PF13855.2|0.0045,LRR_8|PF13855.2|1.5e-08,LRR_8|PF13855.2|0.0029,LRR_8|PF13855.2|0.0015,LRR_8|PF13855.2|7.1e-06,LRR_8|PF13855.2|0.027,LRR_8|PF13855.2|0.0018,LRR_4|PF12799.3|40,LRR_4|PF12799.3|6.6e-05,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|70,LRR_4|PF12799.3|12,LRR_4|PF12799.3|0.031,LRR_4|PF12799.3|0.024,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.045,LRR_4|PF12799.3|0.026,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|45,LRR_1|PF00560.29|0.14,LRR_1|PF00560.29|50,LRR_1|PF00560.29|1.9,LRR_1|PF00560.29|53,LRR_1|PF00560.29|4.4,LRR_1|PF00560.29|46,LRR_1|PF00560.29|50,LRR_1|PF00560.29|11,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|14,LRR_1|PF00560.29|6.6,LRR_1|PF00560.29|1.5e+04,LRR_1|PF00560.29|58,LRR_1|PF00560.29|82,LRR_1|PF00560.29|7.7e+03,LRR_1|PF00560.29|38,LRR_1|PF00560.29|31,LRRNT_2|PF08263.8|1.3e-09,LRRNT_2|PF08263.8|5.5e+03,LRRNT_2|PF08263.8|1.2e+03 R_Transcript_130488:3-1979(+)
ATAAGGCTGTGCAACGGTCACCTTTTGACCTTTCCCACCATGGAATCCTTTGGGAATTCTCTTACCCTCCTTTTCCTTCTTATTTTGGCTACCTACACTACCTCGTTTTCATCCTTTTTAGTAGAATCCTGCAATGCCTTAGACAAAGAGGCATTGCTGGACTTCAAACACAGAATCACCAACGACCCATCAAAGCTCCTTGGAACGTGGGCCCCGGCCACAGACTGCTGCACCTCTTGGGCTGGTGTTGACTGCCACCCTACCACCGGGCGGGTCGTCAACGTCTCACGCCCTGGCCTCGAGTCGGGGGACGACTTCATCCTCGACACCTCCATGTCAGGCACGCTTTCTCCTTCCCTTGGCAACCTTACGTACCTTCAACTCCTTGACCTTAGTAATCTCAAGGACTTAAAAGGTCCCATCCCACCTCAATTAGGTAAGTTGACTCATTTGACCCACCTTTTCCTTGACACAAACAAGCTAAGTGGCCCAATACCCACTTCATTTGGTAACCTCCACAAGCTAGAAAAGCTTTACCTTAGTGACAATAATCTCTCTGGCATCATACCCAAATCTCTTTTCCAATCATTAAAGTCAATTTTCGAATTGGGTTTATCCGAAAATCGATTAACTGGCCTAATCCCACCATCAATTGGGAAATTAACCAAACTTACCAAGCTTGATCTTCATGATAATAGGCTCTCAGGGAGCATACCTACAAGCATTGGCAAACTTAAAAGCCTGACACAAATAGATTTGTCAATCAATCATCTAAGTGGGAGTATACCAAATTCAATTGATCAACTCTCCCAATTACGCCTTTTATATCTTGATCATAACAAACTCACTGGCCCAATTCCTTCTTCCATAGGCTGGCTTGTTTCTTTGCAGTTCTGCCAGTTGGCTGACAATAAATTAACCGGGAATTTACCCGATTCTGTAGGTAATCTCCCTAGGATTCAAAGAATCATTTTGGAGAATAATATGATCTCAGGAAAACTTCCAAATAGCATAGGACATCTTGTTACATTAACCGATATGTTCTTCTCCAACAACCGGTTTACAGGGCATATTCCCAAAAGTTTTGGCAATCTCAAGCACATCCAATCCTTGGATTTGTCAAGAAATCAACTCATTAGTCCACTTCCTTCCCAACTTGCTAATCTCAAAATCTTACAGACTTTGGATTTATCATATAATCCACTTGGTCTAGTGAGCATACCAGATTGGTTCTCCAAGCTGAACCTCTTTAGGCTAAGATTAGCCAACACAGGGATCAAAGGGCAACTTCCTCAATGGTTATCCTCAACCTCGATATCATATCTCGATTTATCGAGCAATGATCTCAAAGGGAAGTTGCCTTCTTGGATAGGGAACATGACCAATTTGTCATTCCTTAACATATCCAACAATGGCTTCTACTCTACCATCCCTGAGGCATTCAAGAATCTTTCTCTCCTTGCGGACCTTGATATTCATTCCAACAAGTTCTCGGGTCATTTAGTAGTTATATTCGATAAGGATTATCAGGATCCATTAGGTCACTACAACTCCATTGATGTTTCTAACAACAGGTTCACCGGTCCACTCGACAACAACTTTGGTAACAAAGTTGTCATGAATTCTATCAATTCATTGATCTTGTCGAATAATCACTTGGGGGGATCGATACCAAAATCGATAGGAAATTTGACAGAGTTGCGAGTGCTTAAGATGGAGGGTGACGGGCTCTCAGGAAGTATACCTAGTGAACTTGGGAATGCTAAGGAATTAAGGACGGTTTTGTTGTCACGGAACAGCTTAAGTGGGAGTATTCCAGGGAGTATTTTGAACTTGAATAAATTGGAGGAGTTTGATGTCTCTAGGAATAAACTAAGAGGAGCAATTCCAACTCACAAGTCTAGGATTCCTGTTTCGGCATTTTTGGGTAATCCTGGCCTTTGTGGAAGTCCATTACCCCCTTGTAAGAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130488.p1 GENE.R_Transcript_130488~~R_Transcript_130488.p1 ORF type:5prime_partial len:659 (+),score=60.64,LRR_8|PF13855.2|3.3e-05,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|1.6e-06,LRR_8|PF13855.2|2e-10,LRR_8|PF13855.2|0.0045,LRR_8|PF13855.2|1.5e-08,LRR_8|PF13855.2|0.0029,LRR_8|PF13855.2|0.0015,LRR_8|PF13855.2|7.1e-06,LRR_8|PF13855.2|0.027,LRR_8|PF13855.2|0.0018,LRR_4|PF12799.3|40,LRR_4|PF12799.3|6.6e-05,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|70,LRR_4|PF12799.3|12,LRR_4|PF12799.3|0.031,LRR_4|PF12799.3|0.024,LRR_4|PF12799.3|19,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.045,LRR_4|PF12799.3|0.026,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|45,LRR_1|PF00560.29|0.14,LRR_1|PF00560.29|50,LRR_1|PF00560.29|1.9,LRR_1|PF00560.29|53,LRR_1|PF00560.29|4.4,LRR_1|PF00560.29|46,LRR_1|PF00560.29|50,LRR_1|PF00560.29|11,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|14,LRR_1|PF00560.29|6.6,LRR_1|PF00560.29|1.5e+04,LRR_1|PF00560.29|58,LRR_1|PF00560.29|82,LRR_1|PF00560.29|7.7e+03,LRR_1|PF00560.29|38,LRR_1|PF00560.29|31,LRRNT_2|PF08263.8|1.3e-09,LRRNT_2|PF08263.8|5.5e+03,LRRNT_2|PF08263.8|1.2e+03 R_Transcript_130488:3-1979(+)
IRLCNGHLLTFPTMESFGNSLTLLFLLILATYTTSFSSFLVESCNALDKEALLDFKHRITNDPSKLLGTWAPATDCCTSWAGVDCHPTTGRVVNVSRPGLESGDDFILDTSMSGTLSPSLGNLTYLQLLDLSNLKDLKGPIPPQLGKLTHLTHLFLDTNKLSGPIPTSFGNLHKLEKLYLSDNNLSGIIPKSLFQSLKSIFELGLSENRLTGLIPPSIGKLTKLTKLDLHDNRLSGSIPTSIGKLKSLTQIDLSINHLSGSIPNSIDQLSQLRLLYLDHNKLTGPIPSSIGWLVSLQFCQLADNKLTGNLPDSVGNLPRIQRIILENNMISGKLPNSIGHLVTLTDMFFSNNRFTGHIPKSFGNLKHIQSLDLSRNQLISPLPSQLANLKILQTLDLSYNPLGLVSIPDWFSKLNLFRLRLANTGIKGQLPQWLSSTSISYLDLSSNDLKGKLPSWIGNMTNLSFLNISNNGFYSTIPEAFKNLSLLADLDIHSNKFSGHLVVIFDKDYQDPLGHYNSIDVSNNRFTGPLDNNFGNKVVMNSINSLILSNNHLGGSIPKSIGNLTELRVLKMEGDGLSGSIPSELGNAKELRTVLLSRNSLSGSIPGSILNLNKLEEFDVSRNKLRGAIPTHKSRIPVSAFLGNPGLCGSPLPPCKNL*

Click here to download the sequence:
Link to NCBI Protein BLAST