Transcript Information: R_Transcript_130542.p1


Annotated TAIR IDAT3G44160.1
Annotated Gene NameOuter membrane OMP85 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:15889225-15891814 | Reverse length=362
E-Value3.9E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6715726058342
Replicate 22.051362684351
Replicate 32.9620781374335
Condition 2: 8 Hour
Replicate 13.3773606823786
Replicate 23.3412811946599
Replicate 33.3382272405309
Condition 3: 24 Hour
Replicate 13.0346526795241
Replicate 23.3589905781626
Replicate 34.1511164061357


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130542.p1 GENE.R_Transcript_130542~~R_Transcript_130542.p1 ORF type:complete len:348 (+),score=63.70,Bac_surface_Ag|PF01103.19|7.2e-18 R_Transcript_130542:372-1415(+)
ATGGGAGCTCAAAAGAGCATCCATGCTGGTAAAGCAAAAATTGATGTCAATGTTGATTTGACTCACAAGCTATGTTCTGCTTTGATGCTTTCTCCTTTCAGGAACACTGGTGGCCCTCTTTCATTAGTGATTGGGAGCCTGTGCATCAAGCATCCCAATTTATTTGGTGGGAGTGAGAAGCTTGATGTGTTTTGGGATAAAGGATTGTATGATACAAATATATTGGTAGCTTATAGGAGGCCAAGGCCGGAATGGCTTCCTCAACAGTCTTTTGTGCTTCAGCATTCTATTTCACCAGAGATTGGGGTACATGGTCTGCCAATCGACAACTTCTCACGAACTGGGAGTGGGGGTGTGAATTTGTGTCGATCTTCTGTCGGTTTAGACTTAAGCGAGCCCGCTAGTTCTAATTGGAGCAGCACAACGAGTGTTAAATTTGAGCATGTTCGCCCAGTCAATGATGAAGGCCATCCAGTAAGTCGTGATCTAGATGGCTTTTCAGTGACATGCAGTGGAGGTTCGCATGACAGTATGATGGTATTAAAGCAGGAAACCCGTTATGCCAGGGCTAATGATAATTGCTTCAGTCGTTTTAGCTTGCAAATAGAACAAGGACTCCCTGTTTTGGCTCGGTGTCTTGTCTTCAATCGATTCAAATTTGTTGGCACAAAGGGTATCAAAGTTGGGCCTGCTTTCCTCTTGACAAGTATCACAGGGGGCTCCATTGTGGGTGATATGGCTCCATACCAAGCCTTTGCAATTGGTGGTCTTGGTAGTGTTCGAGGGTATGGAGAAGGCGCTGTTGGAACAGGGAGATCATGTTTGATTGCCAACAGTGAATTGACATTCCCGTTGAGCAAGATGTTGGAAGGTGCAATTTTCATGGATTATGGTTCTGATCTGGGATCTGGTCGACTTGTTCCTGGAAACCCGGCCTTGAGACAAGGCAAACCCGGGACAGGCATTGGGTTTGGTTATGGCTTACGCTTCAAGTCACAATTGGGTCATTTCCAAATTGATTGTGCTATGAATGGTTATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130542.p1 GENE.R_Transcript_130542~~R_Transcript_130542.p1 ORF type:complete len:348 (+),score=63.70,Bac_surface_Ag|PF01103.19|7.2e-18 R_Transcript_130542:372-1415(+)
MGAQKSIHAGKAKIDVNVDLTHKLCSALMLSPFRNTGGPLSLVIGSLCIKHPNLFGGSEKLDVFWDKGLYDTNILVAYRRPRPEWLPQQSFVLQHSISPEIGVHGLPIDNFSRTGSGGVNLCRSSVGLDLSEPASSNWSSTTSVKFEHVRPVNDEGHPVSRDLDGFSVTCSGGSHDSMMVLKQETRYARANDNCFSRFSLQIEQGLPVLARCLVFNRFKFVGTKGIKVGPAFLLTSITGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGTGRSCLIANSELTFPLSKMLEGAIFMDYGSDLGSGRLVPGNPALRQGKPGTGIGFGYGLRFKSQLGHFQIDCAMNGYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST