Transcript Information: R_Transcript_130584.p1


Annotated TAIR IDAT4G22980.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:12043974-12045653 | Reverse length=559
E-Value8E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5648188695155
Replicate 21.5243215758905
Replicate 31.2874981318681
Condition 2: 8 Hour
Replicate 12.0070381104299
Replicate 22.3041658103329
Replicate 33.0606931256859
Condition 3: 24 Hour
Replicate 12.3656756862271
Replicate 22.5825830082643
Replicate 32.6142223396528


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130584.p1 GENE.R_Transcript_130584~~R_Transcript_130584.p1 ORF type:complete len:427 (+),score=87.98 R_Transcript_130584:732-2012(+)
ATGATCAACAGCTCAGAAAAGAGAGGAGCACAAGCAATGGCAGCCGAGCTTACCTGGCCAAGGCTAAGAATACACTCATCGAAACTAAGGGATATGATTATCAGTAAGAGGCTAAGAAACAAGAAGAGGGGTTTATTTGTTTTTCAGCTCCAGTCAAGAGTGACAGGTGCTAGATACTCTTACCAGTGGATGCGGGTGGCACAGGAACATGGCTGGCATGTCCTGCACGATGCCTGTGCTGTCGGGCCAAAGGACATGGATAGCCTGGGACTCTCACTCTTTCAACCAGATTTCCTGATTTGCTCCTTCTACAAGGTTTTTGGGGAAAACCCATTAGGGTTTGGGTGCCTGTTTGTCAGGAAATCGGCTATTTCTATCCTGGAAGAATCAACAACTGCAGGAATCGCAACTATTGTCTCAACAAGAAGGCTATTTTACCTGCCTGAGGAATCTTCTGGTACAGAAACTGAGATTGAACAAGAATATGATTTGGGTTCATCATCCAACTCGTTCTCAGGTCCGATATTTCCACAATGGGAACACGGAGAGACCTCCGAGTCAGGAGCTATTAGAGATACGAGTGCAAAGCAGAATGGAGAGAAATTCCCTCAGGTTGTGGAGCTAGCAGAGAAATGGTCTGAAATTCTAGAAGTAGAGGAAAACAGTGACCTCTCAGAGTGGCAAAACACCAGAATGATCAGGAAGAAAAAGAATTCCTTAGTTGAATGCAGGTGCTTGAATCAAATTGATTCATTGGGGCTCTCAGTTGTGAATAGCAGGAGCAGGTACCTTGTCAACTGGCTCATAAATGCCTTGCTGAAGCTTCGGCATCCAAATGCAGACAAGGGAGCTCACTTGGTAAAGATATATGGGCCAAAGATCAAGTTTGATAGAGGACCAGCCTTGGCTTTCAATGTGTTTGATTGGAAAGGAGAAAAGGTGGAGCCAATTCTGGTGCAGAAACTGGCTGATCGAAAGAGCATATCCCTTAGCTACGGGTTTCTACACCATATTTGGTTCCCGGAGAAGTATGAAACCGGAAAGGTTGGAATTATTGAGAAAGGAAGATGTGAAGCCAAGGAAAGTAGTTCAGGGAACAAATTAAGAAAAGAAAAGGAAAGCCTTGGTATAAGAGTAGTTACAGCCGCATTTGGGTTTATAGCCAATTTTGCAGATGCTTACAGGCTTTGGACTTTCATTGCTCAGTTTTTGGATGCAGACTTTGTTGAGAAAGAGAGATGGAGATACACTGCCCTTAATCAGAAAACTGTTGAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130584.p1 GENE.R_Transcript_130584~~R_Transcript_130584.p1 ORF type:complete len:427 (+),score=87.98 R_Transcript_130584:732-2012(+)
MINSSEKRGAQAMAAELTWPRLRIHSSKLRDMIISKRLRNKKRGLFVFQLQSRVTGARYSYQWMRVAQEHGWHVLHDACAVGPKDMDSLGLSLFQPDFLICSFYKVFGENPLGFGCLFVRKSAISILEESTTAGIATIVSTRRLFYLPEESSGTETEIEQEYDLGSSSNSFSGPIFPQWEHGETSESGAIRDTSAKQNGEKFPQVVELAEKWSEILEVEENSDLSEWQNTRMIRKKKNSLVECRCLNQIDSLGLSVVNSRSRYLVNWLINALLKLRHPNADKGAHLVKIYGPKIKFDRGPALAFNVFDWKGEKVEPILVQKLADRKSISLSYGFLHHIWFPEKYETGKVGIIEKGRCEAKESSSGNKLRKEKESLGIRVVTAAFGFIANFADAYRLWTFIAQFLDADFVEKERWRYTALNQKTVEI*

Click here to download the sequence:
Link to NCBI Protein BLAST