Transcript Information: R_Transcript_130852.p1


Annotated TAIR IDAT3G62970.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23270636-23272698 | Forward length=287
E-Value4E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4427754437542
Replicate 23.7465517471461
Replicate 33.3210511756504
Condition 2: 8 Hour
Replicate 15.9166588162488
Replicate 23.7406679659976
Replicate 35.3982485116392
Condition 3: 24 Hour
Replicate 17.2543257039214
Replicate 23.1976025900837
Replicate 34.71928205145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130852.p1 GENE.R_Transcript_130852~~R_Transcript_130852.p1 ORF type:complete len:269 (+),score=18.91,zinc_ribbon_6|PF14599.2|2.8e+03,zinc_ribbon_6|PF14599.2|1.3e+04,zinc_ribbon_6|PF14599.2|6.4e+03,zinc_ribbon_6|PF14599.2|2.3e-25,zf-CHY|PF05495.8|1.1e-20,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|49 R_Transcript_130852:218-1024(+)
ATGGCGGAAGAAACCTCTTCTGTTCCCGAAAACCGTGAAGACGACAGTTCTGTTCCCGAAAACACCAACCGTGAAGATTTCGGCAAATTGCAATTCGGATGCGAGCATTACAGAAGAAGATGCAGAATAGTAGCGCCGTGTTGCAATCGAGTTTTCACCTGTCGTCACTGCCATAACGAGGCCATGAGCTCAGTAAGCAATCCTAAGGAGAGACACGAGCTTGTTCGCCATGAAGTTAAGCGAGTTGTTTGTGCTGTTTGTGATACTGAGCAACCGGTTGTTAAAGTCTGCTCTAATTGTGGGGTTAATTTGGGAGAGTATTTCTGTCACGTCTGCAAATTTTATGATGACGAGATTAGTAAAAAACAATTCCATTGTGATGATTGTGGGATTTGCAGGGTTGGTGGTCGTGAGAACTTCTTCCATTGCCCGAAGTGTGGGTCTTGCTATTCAATGGGTCTCCGTGATAATCACTTGTGTGTGGAGAATGCCATGAAGAATTGTTGTCCCATCTGTTACGAGTATCTTTTCGACTCAATCAAAGGCACAACAGTTATGAGGTACCGATGTCCCATATGCTCCAAGTCGACGGTGGACATGTCTAGAAACTGGGAAAGATTAGATGAGGAGATTGGAGCTACTGCCATGCCTGATGAATATCGATATGAGGTTTTAATCCTCTGCAATGATTGCACCAATACAAGCAGAGTGAAATTTCACATATTTGGTCACAAGTGCAGTCACTGCGGCTCCTACAATACTTGTGTAACCCAGAAATTAGACTCTCAGCAGGAGCCATCAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130852.p1 GENE.R_Transcript_130852~~R_Transcript_130852.p1 ORF type:complete len:269 (+),score=18.91,zinc_ribbon_6|PF14599.2|2.8e+03,zinc_ribbon_6|PF14599.2|1.3e+04,zinc_ribbon_6|PF14599.2|6.4e+03,zinc_ribbon_6|PF14599.2|2.3e-25,zf-CHY|PF05495.8|1.1e-20,zf-CHY|PF05495.8|1.6e+04,zf-CHY|PF05495.8|49 R_Transcript_130852:218-1024(+)
MAEETSSVPENREDDSSVPENTNREDFGKLQFGCEHYRRRCRIVAPCCNRVFTCRHCHNEAMSSVSNPKERHELVRHEVKRVVCAVCDTEQPVVKVCSNCGVNLGEYFCHVCKFYDDEISKKQFHCDDCGICRVGGRENFFHCPKCGSCYSMGLRDNHLCVENAMKNCCPICYEYLFDSIKGTTVMRYRCPICSKSTVDMSRNWERLDEEIGATAMPDEYRYEVLILCNDCTNTSRVKFHIFGHKCSHCGSYNTCVTQKLDSQQEPSG*

Click here to download the sequence:
Link to NCBI Protein BLAST