Transcript Information: R_Transcript_130966.p1


Annotated TAIR IDAT5G05810.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL43
Annotation TypeOrtholog
Chromosome Positionchr5:1746938-1747999 | Forward length=353
E-Value4.8E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2201177108769
Replicate 20.5052585661676
Replicate 31.2862071912278
Condition 2: 8 Hour
Replicate 10.32735113565836
Replicate 20.95661526593307
Replicate 30.72800577354493
Condition 3: 24 Hour
Replicate 11.5959972939046
Replicate 20.64868408501698
Replicate 31.5216051386613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_130966.p1 GENE.R_Transcript_130966~~R_Transcript_130966.p1 ORF type:complete len:374 (+),score=18.02,zf-RING_2|PF13639.2|1.2e-13,zf-RING_11|PF17123.1|7.4e-11,zf-rbx1|PF12678.3|1e-07,zf-rbx1|PF12678.3|8.2e+03,zf-C3HC4|PF00097.21|1.4e-06,zf-C3HC4_2|PF13923.2|5.6e-06 R_Transcript_130966:469-1590(+)
ATGTCATCACTACTATTCTTAATCCTCTTCTTGACGTCATCATCCCACGTCAGCTCGCGGCCACTCTCGCCGGAAAACCAACCGGACCAACCACCACCGCCGCCGCCGAGCTACTCCCCCTTCAAGCCAAGCATTGCCGTCATTGTCGCCATACTCACCACCATCTTCTCCATCACCTTCCTCCTTCTCATGTACGCCAAGCACTGCAAAGGAGGGGGACCCTTTATGTCGTCGTTGAGAAGAAACGGGTCGAGTTTTGATCCGGGCGGGTATTACAACAACCACCCGCGTACGGAGAGGAAGAACTCCGGGATTGACCCTCTTGTGATTGAGTCATTGCCGGTCTTCCGGTTCGGGGCGTTGAGGGGCGGGCAGAAGGAGGGGTTGGAGTGCGCGGTTTGTTTGAACCGGTTCGAACCGGCTGAGGTGTTGCGGTTGTTGCCTAAGTGTAAGCATGCTTTCCACGTGGAATGTGTTGACACGTGGCTTGACGCTCATTCCACTTGCCCGCTTTGCCGGTTCAGGGTTGACCCCGAGGACGTTCTGTTAGTCGACCGGTGGAGCTCGGTCGAACCGGATGAGGAGAACCAACTCGATGGTTCTGATTCGACTCACCGAGTCTCCGGTCGCCACTCGTCCGCTTTCGAGAGAGGCAATAATAACATCAGGCATGAATCGACGTCGTGGTGCAGGAGATCGTGTGATGGGATGATGGGGGAAATGTCAGCCGTTAGAAAAGACGGGCTTCTAATCACAGCCGTTGATAAGAACATGAACATCTCAGCAGGAGAGAGAAAAGTGGAGCACAGGAGGATTATTATCACAACTGACCCGGCTGGGCCCCACCAGAGATGGAGCGACGTACAGCCGTGTGATCTGTTCTATCTTCGGACTAAAATGGTGATGAGCAACGAGGGCCGTCGATCTTCGTCGTCATCGAAGCAGGTGCATGGGAATCAGCATAGGGTGCGACTACAGCAGAACAACATTAGTAGTAGTGAGGGGGATGGCAGGAGTGTAATTAACGGGAGAAGTGTGTCGGAAATCACGGGGCTAAGCAGGTTGGCAGAAGGAGCAGTAGTAGAAGGAAATGAGAGTAGGAGAGTTGAGGAGAGAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_130966.p1 GENE.R_Transcript_130966~~R_Transcript_130966.p1 ORF type:complete len:374 (+),score=18.02,zf-RING_2|PF13639.2|1.2e-13,zf-RING_11|PF17123.1|7.4e-11,zf-rbx1|PF12678.3|1e-07,zf-rbx1|PF12678.3|8.2e+03,zf-C3HC4|PF00097.21|1.4e-06,zf-C3HC4_2|PF13923.2|5.6e-06 R_Transcript_130966:469-1590(+)
MSSLLFLILFLTSSSHVSSRPLSPENQPDQPPPPPPSYSPFKPSIAVIVAILTTIFSITFLLLMYAKHCKGGGPFMSSLRRNGSSFDPGGYYNNHPRTERKNSGIDPLVIESLPVFRFGALRGGQKEGLECAVCLNRFEPAEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRFRVDPEDVLLVDRWSSVEPDEENQLDGSDSTHRVSGRHSSAFERGNNNIRHESTSWCRRSCDGMMGEMSAVRKDGLLITAVDKNMNISAGERKVEHRRIIITTDPAGPHQRWSDVQPCDLFYLRTKMVMSNEGRRSSSSSKQVHGNQHRVRLQQNNISSSEGDGRSVINGRSVSEITGLSRLAEGAVVEGNESRRVEERE*

Click here to download the sequence:
Link to NCBI Protein BLAST