Transcript Information: R_Transcript_131003.p1


Annotated TAIR IDAT4G27670.1
Annotated Gene Nameheat shock protein 21
Annotated Gene Symbol(s)HSP21
Annotation TypeHomolog
Chromosome Positionchr4:13819048-13819895 | Reverse length=227
E-Value7E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0140533863733
Replicate 20.21208384258887
Replicate 31.0412153452797
Condition 2: 8 Hour
Replicate 10.61832992291023
Replicate 20.67760248003593
Replicate 31.0084228122437
Condition 3: 24 Hour
Replicate 11.6232792989286
Replicate 20.7797313749194
Replicate 30.99489566758624


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131003.p1 GENE.R_Transcript_131003~~R_Transcript_131003.p1 ORF type:3prime_partial len:198 (+),score=45.66,HSP20|PF00011.17|1.8e+03,HSP20|PF00011.17|4.6e-12 R_Transcript_131003:134-724(+)
ATGGCAAGCAAGGTATTGTCATGCTCAGCATCACCTGTACCTTTGGTTTCAAATAAGGCTTCTTCTTCACCACCCAAAGCCGCTGGCTTTATGCCATGTTCGCTTTCCGTTCCCTTCTCTAACAAACCCAATTCTTTAAGGCTTCCAGTCATAAGAGCTCAACAACCAGCAAGTGGAGATAACAAAGAGGGTAGTCACCACGTTGACGTTCAAGTACAAAAGAGCAACCCTAACCAAGCCACTGCTGTTGAACGTCGCCCTAGAAGACTTGCTCTTGACATCTCTCCTCTTGGAGGATTAATCGACTCGTTATCTCCCATGAGATCAATGCGGCAAATGCTAGACACGATGGACAGGCTATTCGAGGATGCAATGACAATGCCAGGAGGGGTTGGCGAGGTGCGAGCGCCATGGGATGTCATGGAGGATGACAATGAAATCAAGATGAGGTTCGACATGCCAGGCCTCTCTAAGGAAGATGTTAAGGTTTCGGTTGAGGATGACATGCTCGTCATCAAAGGAGAACACAAGAAGGAAGAAGGTGGTCAAAATGATGATGCTTGGGGAAGGAGGAGCTACAGTTCTTATGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131003.p1 GENE.R_Transcript_131003~~R_Transcript_131003.p1 ORF type:3prime_partial len:198 (+),score=45.66,HSP20|PF00011.17|1.8e+03,HSP20|PF00011.17|4.6e-12 R_Transcript_131003:134-724(+)
MASKVLSCSASPVPLVSNKASSSPPKAAGFMPCSLSVPFSNKPNSLRLPVIRAQQPASGDNKEGSHHVDVQVQKSNPNQATAVERRPRRLALDISPLGGLIDSLSPMRSMRQMLDTMDRLFEDAMTMPGGVGEVRAPWDVMEDDNEIKMRFDMPGLSKEDVKVSVEDDMLVIKGEHKKEEGGQNDDAWGRRSYSSYD

Click here to download the sequence:
Link to NCBI Protein BLAST