Transcript Information: R_Transcript_13119.p1


Annotated TAIR IDAT1G27990.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9752799-9753919 | Reverse length=271
E-Value2.1E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13037829253371
Replicate 20.22496036160319
Replicate 30.081809777129116
Condition 2: 8 Hour
Replicate 10.34979807067493
Replicate 20.39930146144974
Replicate 30.38896308472258
Condition 3: 24 Hour
Replicate 10.98390602404446
Replicate 20.23630634525618
Replicate 30.85987411269954


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13119.p1 GENE.R_Transcript_13119~~R_Transcript_13119.p1 ORF type:complete len:280 (+),score=21.14 R_Transcript_13119:201-1040(+)
ATGTCAGGTGTATCCCTTGCGGTGGCTCCTCGTAGTGAGCCAGACAAAGCCACAATGCCAGCCTCAAACCTCGAAGCCAAGCCCTTCCAATCAAAACACCAGCAACAAACCAGCACCACCACCACAGGAATAATGGGATCTTTGCGTGTTATAGAGCTACAACTAGTGGCCTTCATAATGGTCTTCTCTGTTAGTGGCCTAGTACCGCTCCTTGATCTCGTCTTCCCTGCCTTTGCCTCCGCTTACATAATAGCCCTCTCGCGTTTTGCCTTCCCTGCCCACAACAATATTCGATCCAGCTCCCCCGAGCTCTTTCAGGGGAGTAGACTTTTCCGGCTCTACGTTATTTTAGGAACTTCGGTGGGCTTATTTTTGCCCCTTGCATATGTCCTAGGAGGATTTGCAAGAGGGGATGACCATGCTGTGAGGTCAGCCACGCCTCACTTGTTCTTGCTTTCGTTCCAAATACTGACCGAGAATATAATTAGTGGCTTGTCGTTGTTCTCCCCTCCTGTGAGAGCACTGGTTCCCTTGCTTTACACTGTCCGCAGGATCTTTGTTATCCTCGATTGGATGCAGGACGTGTGGTTCAACAAGACCTTGCCCGCCAATCCGCCTATCAAGGATGTTGCATGGTTTTGGTTTGGGAGGGGTCTATCGGTTGCAAATTTAGCGTACTTCTCCATCAACCTCTTTGGCTTTTTGATCCCGCGTTTCCTCCCAAGAGCATTCGAGAGATACTTCAGCGAAAGAGACGAGAGTCACATGAAATTTGCGGAAGATAAGCGCTCTGCTGCTGCTAACACATCTCAGCCAGCAGATAGTAAGAAGGCTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13119.p1 GENE.R_Transcript_13119~~R_Transcript_13119.p1 ORF type:complete len:280 (+),score=21.14 R_Transcript_13119:201-1040(+)
MSGVSLAVAPRSEPDKATMPASNLEAKPFQSKHQQQTSTTTTGIMGSLRVIELQLVAFIMVFSVSGLVPLLDLVFPAFASAYIIALSRFAFPAHNNIRSSSPELFQGSRLFRLYVILGTSVGLFLPLAYVLGGFARGDDHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALVPLLYTVRRIFVILDWMQDVWFNKTLPANPPIKDVAWFWFGRGLSVANLAYFSINLFGFLIPRFLPRAFERYFSERDESHMKFAEDKRSAAANTSQPADSKKAD*

Click here to download the sequence:
Link to NCBI Protein BLAST