Transcript Information: R_Transcript_131226.p1


Annotated TAIR IDAT5G44260.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17829974-17831119 | Reverse length=381
E-Value4E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.093604927972917
Replicate 20.21534667093639
Replicate 30.11747044921104
Condition 2: 8 Hour
Replicate 11.25568538191
Replicate 20.68802713357494
Replicate 32.6063851147222
Condition 3: 24 Hour
Replicate 10.23546468951491
Replicate 20.2262077834931
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131226.p1 GENE.R_Transcript_131226~~R_Transcript_131226.p1 ORF type:3prime_partial len:195 (+),score=25.01,zf-CCCH|PF00642.20|1.2e+02,zf-CCCH|PF00642.20|4.7e-08,zf-CCCH|PF00642.20|1.4e+03 R_Transcript_131226:87-668(+)
ATGATGGGAAGTGTTTGTGCTGAGCACTATCACCACCACCATAGCCACCACCACCAACACCACAGCCAAAAGTACCACCCATTGATGTCTCCTAAGAAGAATCTCCAAGACCTTAATATCCCACCTAGGAAGCTCCTCTCTCGCCGCTCCACTCTTTCTCCTGACCACTCCGACTACTTCCCCGTCGACTCGCCTTCCAAGCTCCTCCAAGCTGAGGCCCTCCTGCAGAAGTTCCTCCCCTACAACGGGGACTCCTCGTCAGCGTCGTCGGATCGTGACGACGGGTTGTTCGACCCGGATGCTGACCCTTACTCCTCTGACCAGTTCCGGATGTACGAGTTCAAGGTGAGGAAGTGCACAAGGAGCCGTAGTCATGACTGGACTGACTGCCCCTTCTCCCACCCTGGGGAGAAAGCCCGGCGCCGAGACCCAAGGAGGTTCCATTATTCGGGGACAGTCTGCCCCGAATACCGCCGCTCCGGGAGCTGCTCTAGGGGAGATGAGTGCGAATATGCTCATGGTGTGTTTGAGTGTTGGCTACACCCTGCTAGGTACCGCACTGAGGCTTGCAAGGATGGCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131226.p1 GENE.R_Transcript_131226~~R_Transcript_131226.p1 ORF type:3prime_partial len:195 (+),score=25.01,zf-CCCH|PF00642.20|1.2e+02,zf-CCCH|PF00642.20|4.7e-08,zf-CCCH|PF00642.20|1.4e+03 R_Transcript_131226:87-668(+)
MMGSVCAEHYHHHHSHHHQHHSQKYHPLMSPKKNLQDLNIPPRKLLSRRSTLSPDHSDYFPVDSPSKLLQAEALLQKFLPYNGDSSSASSDRDDGLFDPDADPYSSDQFRMYEFKVRKCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYSGTVCPEYRRSGSCSRGDECEYAHGVFECWLHPARYRTEACKDGK

Click here to download the sequence:
Link to NCBI Protein BLAST