Transcript Information: R_Transcript_131283.p1


Annotated TAIR IDAT1G20780.1
Annotated Gene Namesenescence-associated E3 ubiquitin ligase 1
Annotated Gene Symbol(s)PUB44, ATPUB44, SAUL1
Annotation TypeHomolog
Chromosome Positionchr1:7217812-7220609 | Forward length=801
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1421567868619
Replicate 21.0780496546265
Replicate 31.792214188452
Condition 2: 8 Hour
Replicate 11.3170880900719
Replicate 21.2027858203083
Replicate 31.9971209729032
Condition 3: 24 Hour
Replicate 12.7504463426834
Replicate 21.402045797445
Replicate 32.8898192007151


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131283.p1 GENE.R_Transcript_131283~~R_Transcript_131283.p1 ORF type:3prime_partial len:409 (-),score=63.01,Arm|PF00514.19|1.5e+03,Arm|PF00514.19|3.1e+03,Arm|PF00514.19|3e+02,Arm|PF00514.19|0.2,Arm|PF00514.19|0.073,Arm|PF00514.19|88,Arm|PF00514.19|3.3,Arm|PF00514.19|0.087,Arm|PF00514.19|0.21,HEAT_2|PF13646.2|10,HEAT_2|PF13646.2|4.3e+02,HEAT_2|PF13646.2|0.17,HEAT_2|PF13646.2|0.073,HEAT_2|PF13646.2|1.9,HEAT_2|PF13646.2|51,HEAT_2|PF13646.2|98,HEAT|PF02985.18|1.6e+04,HEAT|PF02985.18|1.6e+04,HEAT|PF02985.18|0.016,HEAT|PF02985.18|3.8e+02,HEAT|PF02985.18|18 R_Transcript_131283:2-1051(-)
ATGGCTGAGGCTTCTTATTTTCAACCTTTAATCCAGCACCTTAAACAAGGTTCTGAAATGAGTAAAATTCTGATGGCGACTGCACTTTCGAGGATGAAATTGATGGATAAAACCAGAACTTCACTCGGAGAGGATGGTGTGATTGAACCCCTAGTAATCATGTTCAAGACAGGAAAGCTTGAAGCCAAATTATCAGCCTTGAATGCATTGCAAAATCTATCGATTTCAATTGAAAATATCTCATATATGCTTGGTGCCGGTATCCTAGCTCCCCTGATTCAGCTGCTTTTCTCTGTAACTTCTTCTCTGATGACCCTCCGAGAGCCAGCATCTGCTATTCTTGCAAAGGTAGCACAATCAGAATCCATTCTTGAGCATAAAGACTTGCCCGATCAACTTCTGTCTCTCGTGAACTTGTCTAGTCCGAAGATTAAGTGCCATATATTAGTAGCTTTGAATAACATCGCTTCTCATCCTAGTGCATCTGAAGTCAGAAGCAAGATGCATGAAAATGGAGCCATGCCACTTTTGCTCCCTTTCCTTGACGATACTGACACCAAAATCAGGACAGCTTCCCTGAATCTGCTGTATACAATTTCGAAAGATATATCAGGAGAGTTTACAGGACTTGTAGAGGAAAAGTATCTTGAAACCATTGTGGGAATCATCTCATCGTCATTGTCAGATACTGAAAAAGCAGCTGCAGTTGGCTTTTTGAGTAATATCCCATTGGTTGATAAGAAGGCAACGGATAAACTCAAAAAGGCAAACCTGTTACCCATATTGATCTCGTTGATCAGTAGTTCCTCAAGTTCAACACAGACAATGTGCTGGTTAGAAGAAAGTATTGCTGGTATTTGTATCAGGTTTACGAATCCTTCTGACAAAAAGTTACAGCTCTATTCTGCAGAACACGGAGTTATACCTGTCCTAGTGAAGCTGCTGTCAGGTGGGTCAGTCAAAGCTAAATCCCGAGCTGCAATATCACTGACTCAACTAGCACAAAACTTGAATTCTCTTAGAAGGCCTAAAAGTTCTCGGTGGGGTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131283.p1 GENE.R_Transcript_131283~~R_Transcript_131283.p1 ORF type:3prime_partial len:409 (-),score=63.01,Arm|PF00514.19|1.5e+03,Arm|PF00514.19|3.1e+03,Arm|PF00514.19|3e+02,Arm|PF00514.19|0.2,Arm|PF00514.19|0.073,Arm|PF00514.19|88,Arm|PF00514.19|3.3,Arm|PF00514.19|0.087,Arm|PF00514.19|0.21,HEAT_2|PF13646.2|10,HEAT_2|PF13646.2|4.3e+02,HEAT_2|PF13646.2|0.17,HEAT_2|PF13646.2|0.073,HEAT_2|PF13646.2|1.9,HEAT_2|PF13646.2|51,HEAT_2|PF13646.2|98,HEAT|PF02985.18|1.6e+04,HEAT|PF02985.18|1.6e+04,HEAT|PF02985.18|0.016,HEAT|PF02985.18|3.8e+02,HEAT|PF02985.18|18 R_Transcript_131283:2-1051(-)
MAEASYFQPLIQHLKQGSEMSKILMATALSRMKLMDKTRTSLGEDGVIEPLVIMFKTGKLEAKLSALNALQNLSISIENISYMLGAGILAPLIQLLFSVTSSLMTLREPASAILAKVAQSESILEHKDLPDQLLSLVNLSSPKIKCHILVALNNIASHPSASEVRSKMHENGAMPLLLPFLDDTDTKIRTASLNLLYTISKDISGEFTGLVEEKYLETIVGIISSSLSDTEKAAAVGFLSNIPLVDKKATDKLKKANLLPILISLISSSSSSTQTMCWLEESIAGICIRFTNPSDKKLQLYSAEHGVIPVLVKLLSGGSVKAKSRAAISLTQLAQNLNSLRRPKSSRWGC

Click here to download the sequence:
Link to NCBI Protein BLAST