Transcript Information: R_Transcript_131285.p1


Annotated TAIR IDAT1G20780.1
Annotated Gene Namesenescence-associated E3 ubiquitin ligase 1
Annotated Gene Symbol(s)PUB44, ATPUB44, SAUL1
Annotation TypeHomolog
Chromosome Positionchr1:7217812-7220609 | Forward length=801
E-Value6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.171268680925
Replicate 211.500486157671
Replicate 314.618872737243
Condition 2: 8 Hour
Replicate 112.858155210991
Replicate 214.38287877222
Replicate 312.359513764133
Condition 3: 24 Hour
Replicate 113.382440394039
Replicate 29.5868336383665
Replicate 313.253610124478


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131285.p1 GENE.R_Transcript_131285~~R_Transcript_131285.p1 ORF type:complete len:398 (+),score=60.78,Arm|PF00514.19|85,Arm|PF00514.19|3.7,Arm|PF00514.19|0.085,Arm|PF00514.19|0.2,Arm|PF00514.19|2.2,Arm|PF00514.19|9.6e+02,HEAT|PF02985.18|1.6e+04,HEAT|PF02985.18|0.016,HEAT|PF02985.18|3.6e+02,HEAT|PF02985.18|26,HEAT|PF02985.18|2.5e+03,HEAT|PF02985.18|43,HEAT_2|PF13646.2|0.28,HEAT_2|PF13646.2|0.07,HEAT_2|PF13646.2|1.4e+02,HEAT_2|PF13646.2|51,HEAT_2|PF13646.2|14,HEAT_2|PF13646.2|1.8e+02 R_Transcript_131285:1452-2645(+)
ATGACCCTCCGAGAGCCAGCATCTGCTATTCTTGCAAAGGTAGCACAGTCGGAATCCATTCTCGAGCATAAAGACTTGCCCGATCAACTTCTGTCTCTCGTGAACTTGTCTAGTCCGAAGATTAAGTGCCATATATTAGTAGCTTTGAATAACATTGCTTCTCATCCTAGTGCATCTGATGTAAGAAGCAAGATGCATGAAAATGGAGCCATGCCACTTTTGCTCCCTTTCCTTGACGATACTGACACCAAAATCAGGACAGCTTCCCTGAATCTGCTGTATACAATCTCGAAAGATATATCAGGAGAGTTTACAGGACTTTTAGAGGAGAAGTATCTTGAAACCATTGTGGGAATCATCTCATCGTCATTGTCAGATACTGAAAAAGCAGCTGCAGTTGGCTTTTTGAGTAATATCCCATTGGTTGATAAGAAGGCAACGGATAAACTCAAAAAGGCAAACCTGTTACCCATATTGATCTCATTGATCAGTAGTTCCTCAAGTTCAACACAGACAATGTGCTGGTTAGAAGAAAGTATTGCTGGCATTTGTATCAGGTTTACGAATCCTTCTGACAAAAAGTTACAGCTCTATTCTGCAGAACACGGAGTTATACCTGTCCTAGTGAAGCTGCTGTCAGGAGGGTCAGTCAAAGCAAAATCCCGAGCTGCAATATCACTGACTCAACTAGCACAAAACTCGACATCTCTTAGAAGGCCTAAAAGTTCTCGGTGGGGTTGTGTTCCTTCACCAACAGACGCATTTTGTGAAGTTCATGGGAAAAACTGTACTGTCAAAGGGAGTTTCTGCTTGATAAAAGCAGGTGCTGTTTTACCTTTGATTCACATTTTGGAAGGTGAGAAAAGGGAAGCCGATGAAGCCGTCTTAAGTGCACTAGCGACTCTCTTGCAGGACAACCTTTGGGAAAATGGAAGCAATTTCATAGCTAAACTCTCGGGTGGTGTTGAGGCTATCATTAGAGTCCTAGAACTAGGTACCATGAGGGCTCAAGAAAAGGCTTTGTGGATTCTAGAGAGGATATTTCGAAATGACGATTATAGGTTTCAGTATGGGGGATCTGCTCAAGTGGTGCTAATTAATCTTGCTCAGAAGGGGGAGCCAGATTTGAGACTAGCAGTGGCTAAGTTATTGGTACAGCTTGATCTGTTACAACTTCAATCTACCTACTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131285.p1 GENE.R_Transcript_131285~~R_Transcript_131285.p1 ORF type:complete len:398 (+),score=60.78,Arm|PF00514.19|85,Arm|PF00514.19|3.7,Arm|PF00514.19|0.085,Arm|PF00514.19|0.2,Arm|PF00514.19|2.2,Arm|PF00514.19|9.6e+02,HEAT|PF02985.18|1.6e+04,HEAT|PF02985.18|0.016,HEAT|PF02985.18|3.6e+02,HEAT|PF02985.18|26,HEAT|PF02985.18|2.5e+03,HEAT|PF02985.18|43,HEAT_2|PF13646.2|0.28,HEAT_2|PF13646.2|0.07,HEAT_2|PF13646.2|1.4e+02,HEAT_2|PF13646.2|51,HEAT_2|PF13646.2|14,HEAT_2|PF13646.2|1.8e+02 R_Transcript_131285:1452-2645(+)
MTLREPASAILAKVAQSESILEHKDLPDQLLSLVNLSSPKIKCHILVALNNIASHPSASDVRSKMHENGAMPLLLPFLDDTDTKIRTASLNLLYTISKDISGEFTGLLEEKYLETIVGIISSSLSDTEKAAAVGFLSNIPLVDKKATDKLKKANLLPILISLISSSSSSTQTMCWLEESIAGICIRFTNPSDKKLQLYSAEHGVIPVLVKLLSGGSVKAKSRAAISLTQLAQNSTSLRRPKSSRWGCVPSPTDAFCEVHGKNCTVKGSFCLIKAGAVLPLIHILEGEKREADEAVLSALATLLQDNLWENGSNFIAKLSGGVEAIIRVLELGTMRAQEKALWILERIFRNDDYRFQYGGSAQVVLINLAQKGEPDLRLAVAKLLVQLDLLQLQSTYF*

Click here to download the sequence:
Link to NCBI Protein BLAST