Transcript Information: R_Transcript_131442.p1


Annotated TAIR IDAT5G49660.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20161401-20164534 | Reverse length=966
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2900584033667
Replicate 20.14299410045152
Replicate 30.28600920948658
Condition 2: 8 Hour
Replicate 10.22234610621789
Replicate 20.1269062533552
Replicate 30.35025809369646
Condition 3: 24 Hour
Replicate 10.15635283015463
Replicate 20.1752404225131
Replicate 30.22359743721007


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131442.p1 GENE.R_Transcript_131442~~R_Transcript_131442.p1 ORF type:complete len:881 (+),score=120.99,Pkinase|PF00069.21|8.4e-35,LRR_8|PF13855.2|0.043,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0081,LRR_8|PF13855.2|1.7e-05,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|0.46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|3e-06,Pkinase_Tyr|PF07714.13|1.6e-24,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.0023,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0052,LRR_4|PF12799.3|18,LRR_4|PF12799.3|13,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.5,LRR_1|PF00560.29|28,LRR_1|PF00560.29|22,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|7.9e+02,LRR_1|PF00560.29|3.6e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|44,LRR_1|PF00560.29|18,LRR_1|PF00560.29|1.6e+03 R_Transcript_131442:833-3475(+)
ATGGCGCTCCAATTTATCTGTTTATCTTCTTTCCTATTATTTCTTTCCCTCCTTAACCCTCTCCAAGCCACAAATGATAAGCAGTCTCAATATTTCAGCCTCATGAAAAGATCTCTCTCAGGTAACACCTGGTCTGACTGGAGCGCCAAGGGAGAGAATTCATATTGTAACTACACTGGAGTTGCATGCAATATTCAAGGGCAGGTCACCAAGGTTAATATTTCAGGATGGTCGCTAGAGGGCTCGTTTCCACCAGACGTGTGCTCATATCTGCCTGAGTTGCGTGCTCTAGATATTAGCAACAATAAGATCGTAGGCAATTTCCCAGATGGCATCATCAACTGCTCCTTCTTGGAAGTGCTCAACATGAGTTTCTTATATCTCGGTGGGAAGTTGCCAAATTTCTCCCGCATGAACTCCCTTCGTGTGCTGGACTTATCATACAACAAATTTGCAGGAGATTTCCCCGTGTCCATTACCAACCTTACCAATCTTGAGGTTGTAAACTTCAATGAGAATGGCAACTTTAATCCCTGGGAACTTCCAGAGGACATCACGGAATTGAAGAAGCTCACGTCATTGATCCTGTCAACCTGCATGCTTCAGGGTCCTATCTTACCATCCCTAGGAAACATGACTTCCCTTGTTGATCTTGAATTAAGTGGAAACTACCTGAGTGGGAAAATTCCAGCAGAGCTAGGGAGACTAAAGAACCTCAAGTCCCTCATGCTTTACTATAATCAAAGGCTCACAGGGTCAATACCAGAAGAGTTGGGAAATCTCACAGAGCTTAGGGATCTGGACTTATCAGTTAATCAGTTGACCGGAAGGATACCAGATTCAATATGTAGTCTTCCCAAACTCAATTCCTTACAGCTTTACAACAACAGCCTCACAGGAGAAATTCCAGCTGTTCTGGGGGGCTCAAAAACTTTGAGCATCTTATCCATCTACGACAACTTTCTGACAGGTGAGGTTCCACAAAACCTTGGGAAGCTATCATCTATGATTCTATTAGACTTGTCAGAGAATCAACTGTCCGGAAGATTGCCACCATACATCTGCAACGGAGGTAAACTCATATACTTTCTTGTTCTTTCCAATAAGTTCACAGGAGAAATACCTGAGAATTATGTGAAGTGCACATCACTTCAACGGTTCCGAGTTAGCAACAACCAGTTAGAGGGTAATGTACCAGAAGGACTTTTTGGTCTCCCCCATGTGTCCATCATTGATTTGGCTTCCAATCAACTCACTGGTCCAATATCCCCAGAGATTAGAAATGCCAGAAATATGTCAGAATTCTTAGCTCAGAACAACAAAATGTCAGGAGCTATACCTCCTGAGATATCTGGAGCACTCAATTTGGTGAAAATTGACCTAAGCAACAATCTTCTATCTGGGCCTATACCTACAGAACTTGGTAACCTCAAAAAGCTCAACCTGTTGTTGTTACGAAGCAACAAGCTCACTTCTTCCATCCCAGAATCTCTCTCACAACTGAAGTCCCTTAATTTTCTTGATCTATCTAACAACCAGTTGACAGGAAATGTCCCTGAGAACATATCTGAATTACTTCCTAACTCCCTTAACTTCTCAAATAATCACCTTTATGGTCCCATTCCTCTCTCACTAATTAAAGGGGGTCTTGAGGAAAGCTTCTTTGGCAATCCAGGTCTCTGTGTGACAGCATATTTAAATTCATCAGATACAAGTTTCCCACTTTGCTCTCAAACTTACAGCAAGAAGAAACTAAACCAAATGTGGGTGATAGTGGCCTCAGTGGTCATTCTATTGGTTGGAGGTATCTTGCTCCTAAAACGCTGGTCAAGCAAACAGAAATCATTAATAGGACATGATGAGACCATGTCATCATCTTTTTGCTCATATGACATAAAAAGTTTCCACAGAATAAGCTTTGATCAGCGTGAGATCCTAGAAGCCATGGTTGAGAAGAACATTCTTGGTCATGGGGGATCAGGAACTGTGTACAGAATCGGTTTAAGCAGCGGGGAAATTGTTGCAGTGAAGAAGTTGTGGAGCCAAAACACGAAAGACTCTCTGTCAGAAGACCAACTATTCCCAAGCAAAGAACTTCAGACAGAAGTTCAGACTCTTGGCAGTATAAGGCACAAGAACATCGTGAAGTTGTACTGTTATTTGTCAAGTTGGGATTGTAGCTTGCTGGTTTATGAGTACATGCCAAATGGAAACCTTTGGGATGCCCTTCACAAAGGAAAGATTCTATTGGATTGGCCAACCCGCCATCAGATTGCCTTGGGAGTTGCCCAGGGTTTGGCTTATCTTCATCATGATTTGCTGCCGCCAATTGTTCACAGAGACGTCAAGTCATCCAACATCCTCCTTGACGTTGATCACCAGCCCAAGGTTGCAGACTTTGGTGTGGCCAAGGTCCTGCAGGCCAAGACTGGAAAGGATTCTAGCCACACTGTTGTTGCAGGGACTTACGGCTACATGGATCCAGGTAAGACCAAACATTCTTATGTCTTCGGCTTTTGCAACCAAGTTAGTCACAAAATGAACATCTTACAATATATTTTTAAGCCATATAATCTGCATGTAATCCCCTTACATTTTTCTTTAATTTTTCCAGATCTACTAGCAAACCGCCCTGAACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131442.p1 GENE.R_Transcript_131442~~R_Transcript_131442.p1 ORF type:complete len:881 (+),score=120.99,Pkinase|PF00069.21|8.4e-35,LRR_8|PF13855.2|0.043,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0081,LRR_8|PF13855.2|1.7e-05,LRR_8|PF13855.2|2.1e-05,LRR_8|PF13855.2|0.46,LRR_8|PF13855.2|0.006,LRR_8|PF13855.2|3e-06,Pkinase_Tyr|PF07714.13|1.6e-24,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.013,LRR_4|PF12799.3|0.0023,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0052,LRR_4|PF12799.3|18,LRR_4|PF12799.3|13,LRR_4|PF12799.3|1.8,LRR_4|PF12799.3|1.7,LRR_4|PF12799.3|0.5,LRR_1|PF00560.29|28,LRR_1|PF00560.29|22,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|7.9e+02,LRR_1|PF00560.29|3.6e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|44,LRR_1|PF00560.29|18,LRR_1|PF00560.29|1.6e+03 R_Transcript_131442:833-3475(+)
MALQFICLSSFLLFLSLLNPLQATNDKQSQYFSLMKRSLSGNTWSDWSAKGENSYCNYTGVACNIQGQVTKVNISGWSLEGSFPPDVCSYLPELRALDISNNKIVGNFPDGIINCSFLEVLNMSFLYLGGKLPNFSRMNSLRVLDLSYNKFAGDFPVSITNLTNLEVVNFNENGNFNPWELPEDITELKKLTSLILSTCMLQGPILPSLGNMTSLVDLELSGNYLSGKIPAELGRLKNLKSLMLYYNQRLTGSIPEELGNLTELRDLDLSVNQLTGRIPDSICSLPKLNSLQLYNNSLTGEIPAVLGGSKTLSILSIYDNFLTGEVPQNLGKLSSMILLDLSENQLSGRLPPYICNGGKLIYFLVLSNKFTGEIPENYVKCTSLQRFRVSNNQLEGNVPEGLFGLPHVSIIDLASNQLTGPISPEIRNARNMSEFLAQNNKMSGAIPPEISGALNLVKIDLSNNLLSGPIPTELGNLKKLNLLLLRSNKLTSSIPESLSQLKSLNFLDLSNNQLTGNVPENISELLPNSLNFSNNHLYGPIPLSLIKGGLEESFFGNPGLCVTAYLNSSDTSFPLCSQTYSKKKLNQMWVIVASVVILLVGGILLLKRWSSKQKSLIGHDETMSSSFCSYDIKSFHRISFDQREILEAMVEKNILGHGGSGTVYRIGLSSGEIVAVKKLWSQNTKDSLSEDQLFPSKELQTEVQTLGSIRHKNIVKLYCYLSSWDCSLLVYEYMPNGNLWDALHKGKILLDWPTRHQIALGVAQGLAYLHHDLLPPIVHRDVKSSNILLDVDHQPKVADFGVAKVLQAKTGKDSSHTVVAGTYGYMDPGKTKHSYVFGFCNQVSHKMNILQYIFKPYNLHVIPLHFSLIFPDLLANRPEH*

Click here to download the sequence:
Link to NCBI Protein BLAST