Transcript Information: R_Transcript_131445.p1


Annotated TAIR IDAT5G49660.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20161401-20164534 | Reverse length=966
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.061825609772
Replicate 26.111189310357
Replicate 38.7626605357423
Condition 2: 8 Hour
Replicate 17.8650023583147
Replicate 29.2744198073109
Replicate 39.7550755620999
Condition 3: 24 Hour
Replicate 18.4480912251635
Replicate 25.5482044194592
Replicate 37.1897242006856


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_131445.p1 GENE.R_Transcript_131445~~R_Transcript_131445.p1 ORF type:complete len:962 (+),score=143.73,Pkinase|PF00069.21|2e-48,Pkinase_Tyr|PF07714.13|2.2e-38,LRR_8|PF13855.2|0.048,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0093,LRR_8|PF13855.2|2e-05,LRR_8|PF13855.2|2.5e-05,LRR_8|PF13855.2|0.5,LRR_8|PF13855.2|0.0067,LRR_8|PF13855.2|3.4e-06,LRR_4|PF12799.3|0.35,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|0.0025,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|8.3,LRR_4|PF12799.3|2,LRR_4|PF12799.3|2.9,LRR_4|PF12799.3|3,LRR_1|PF00560.29|31,LRR_1|PF00560.29|24,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|9.7e+02,LRR_1|PF00560.29|1.7,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|4e+02,LRR_1|PF00560.29|17,LRR_1|PF00560.29|49,LRR_1|PF00560.29|2e+02 R_Transcript_131445:833-3718(+)
ATGGCGCTCCAATTTATCTGTTTATCTTCTTTCCTATTATTTCTTTCCCTCCTTAACCCTCTCCAAGCCACAAATGATAAGCAGTCTCAATATTTCAGCCTCATGAAAAGATCTCTCTCAGGTAACACCTGGTCTGACTGGAGCGCCAAGGGAGAGAATTCATATTGTAACTACACTGGAGTTGCATGCAATATTCAAGGGCAGGTCACCAAGGTTAATATTTCAGGATGGTCGCTAGAGGGCTCGTTTCCACCAGACGTGTGCTCATATCTGCCTGAGTTGCGTGCTCTAGATATTAGCAACAATAAGATCGTAGGCAATTTCCCAGATGGCATCATCAACTGCTCCTTCTTGGAAGTGCTCAACATGAGTTTCTTATATCTCGGTGGGAAGTTGCCAAATTTCTCCCGCATGAACTCCCTTCGTGTGCTGGACTTATCATACAACAAATTTGCAGGAGATTTCCCCGTGTCCATTACCAACCTTACCAATCTTGAGGTTGTAAACTTCAATGAGAATGGCAACTTTAATCCCTGGGAACTTCCAGAGGACATCACGGAATTGAAGAAGCTCACGTCATTGATCCTGTCAACCTGCATGCTTCAGGGTCCTATCTTACCATCCCTAGGAAACATGACTTCCCTTGTTGATCTTGAATTAAGTGGAAACTACCTGAGTGGGAAAATTCCAGCAGAGCTAGGGAGACTAAAGAACCTCAAGTCCCTCATGCTTTACTATAATCAAAGGCTCACAGGGTCAATACCAGAAGAGTTGGGAAATCTCACAGAGCTTAGGGATCTGGACTTATCAGTTAATCAGTTGACCGGAAGGATACCAGATTCAATATGTAGTCTTCCCAAACTCAATTCCTTACAGCTTTACAACAACAGCCTCACAGGAGAAATTCCAGCTGTTCTGGGGGGCTCAAAAACTTTGAGCATCTTATCCATCTACGACAACTTTCTGACAGGTGAGGTTCCACAAAACCTTGGGAAGCTATCATCTATGATTCTATTAGACTTGTCAGAGAATCAACTGTCCGGAAGATTGCCACCATACATCTGCAACGGAGGTAAACTCATATACTTTCTTGTTCTTTCCAATAAGTTCACAGGAGAAATACCTGAGAATTATGTGAAGTGCACATCACTTCAACGGTTCCGAGTTAGCAACAACCAGTTAGAGGGTAATGTACCAGAAGGACTTTTTGGTCTCCCCCATGTGTCCATCATTGATTTGGCTTCCAATCAACTCACTGGTCCAATATCCCCAGAGATTAGAAATGCCAGAAATATGTCAGAATTCTTAGCTCAGAACAACAAAATGTCAGGAGCTATACCTCCTGAGATATCTGGAGCACTCAATTTGGTGAAAATTGACCTAAGCAACAATCTTCTATCTGGGCCTATACCTACAGAACTTGGTAACCTCAAAAAGCTCAACCTGTTGTTGTTACGAAGCAACAAGCTCACTTCTTCCATCCCAGAATCTCTCTCACAACTGAAGTCCCTTAATTTTCTTGATCTATCTAACAACCAGTTGACAGGAAATGTCCCTGAGAACATATCTGAATTACTTCCTAACTCCCTTAACTTCTCAAATAATCACCTTTATGGTCCCATTCCTCTCTCACTAATTAAAGGGGGTCTTGAGGAAAGCTTCTTTGGCAATCCAGGTCTCTGTGTGACAGCATATTTAAATTCATCAGATACAAGTTTCCCACTTTGCTCTCAAACTTACAGCAAGAAGAAACTAAACCAAATGTGGGTGATAGTGGCCTCAGTGGTCATTCTATTGGTTGGAGGTATCTTGCTCCTAAAACGCTGGTCAAGCAAACAGAAATCATTAATAGGACATGATGAGACCATGTCATCATCTTTTTGCTCATATGACATAAAAAGTTTCCACAGAATAAGCTTTGATCAGCGTGAGATCCTAGAAGCCATGGTTGAGAAGAACATTCTTGGTCATGGGGGATCAGGAACTGTGTACAGAATCGGTTTAAGCAGCGGGGAAATTGTTGCAGTGAAGAAGTTGTGGAGCCAAAACACGAAAGACTCTCTGTCAGAAGACCAACTATTCCCAAGCAAAGAACTTCAGACAGAAGTTCAGACTCTTGGCAGTATAAGGCACAAGAACATCGTGAAGTTGTACTGTTATTTGTCAAGTTGGGATTGTAGCTTGCTGGTTTATGAGTACATGCCAAATGGAAACCTTTGGGATGCCCTTCACAAAGGAAAGATTCTATTGGATTGGCCAACCCGCCATCAGATTGCCTTGGGAGTTGCCCAGGGTTTGGCTTACCTTCATCATGATTTGCTGCCCCCAATTGTTCACAGAGACATCAAGTCATCCAACATACTCCTTGACGTTGATAACCAGCCAAAGGTTGCAGACTTTGGTGTGGCCAAGGTCCTGCAGGCCAAGACTGGAAAGGATTCTAGCCACACTGTTGTTGCAGGGACTTACGGCTACATGGATCCAGATTATGCAAACACATCCAAGGCGACAACAAAGTGTGACATTTACAGCTTTGGTGTAGTATTAATGGAGCTTGTTACAGGAAAGAAGCCAGTGGAGCCAGAGTTTGGCGAGAACAAGAACATTATAAATTGGGTTTCAACTAAGGTTCAGACGAAGGAAGGAGCTATGGAGATCTTGGACAAACGTGTTTCAGGCTCATTCACAGAAGATATGATTCAAGTGATCCGCATAGCAATTCGCTGTACAGCTCGGGCTCCTGCCCCTCGCCCAACAATGAGCGAAATTGTTCAGCTACTCAGTGAGTCAGATCCATGCAGATTTGACTCTTACAAGTCAACAAATAAGACCACAGATGCATCAAATACCACAAAGATTAATAAAACATTAGAACTAACACTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_131445.p1 GENE.R_Transcript_131445~~R_Transcript_131445.p1 ORF type:complete len:962 (+),score=143.73,Pkinase|PF00069.21|2e-48,Pkinase_Tyr|PF07714.13|2.2e-38,LRR_8|PF13855.2|0.048,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0093,LRR_8|PF13855.2|2e-05,LRR_8|PF13855.2|2.5e-05,LRR_8|PF13855.2|0.5,LRR_8|PF13855.2|0.0067,LRR_8|PF13855.2|3.4e-06,LRR_4|PF12799.3|0.35,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|0.0025,LRR_4|PF12799.3|0.017,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|8.3,LRR_4|PF12799.3|2,LRR_4|PF12799.3|2.9,LRR_4|PF12799.3|3,LRR_1|PF00560.29|31,LRR_1|PF00560.29|24,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|9.7e+02,LRR_1|PF00560.29|1.7,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|4e+02,LRR_1|PF00560.29|17,LRR_1|PF00560.29|49,LRR_1|PF00560.29|2e+02 R_Transcript_131445:833-3718(+)
MALQFICLSSFLLFLSLLNPLQATNDKQSQYFSLMKRSLSGNTWSDWSAKGENSYCNYTGVACNIQGQVTKVNISGWSLEGSFPPDVCSYLPELRALDISNNKIVGNFPDGIINCSFLEVLNMSFLYLGGKLPNFSRMNSLRVLDLSYNKFAGDFPVSITNLTNLEVVNFNENGNFNPWELPEDITELKKLTSLILSTCMLQGPILPSLGNMTSLVDLELSGNYLSGKIPAELGRLKNLKSLMLYYNQRLTGSIPEELGNLTELRDLDLSVNQLTGRIPDSICSLPKLNSLQLYNNSLTGEIPAVLGGSKTLSILSIYDNFLTGEVPQNLGKLSSMILLDLSENQLSGRLPPYICNGGKLIYFLVLSNKFTGEIPENYVKCTSLQRFRVSNNQLEGNVPEGLFGLPHVSIIDLASNQLTGPISPEIRNARNMSEFLAQNNKMSGAIPPEISGALNLVKIDLSNNLLSGPIPTELGNLKKLNLLLLRSNKLTSSIPESLSQLKSLNFLDLSNNQLTGNVPENISELLPNSLNFSNNHLYGPIPLSLIKGGLEESFFGNPGLCVTAYLNSSDTSFPLCSQTYSKKKLNQMWVIVASVVILLVGGILLLKRWSSKQKSLIGHDETMSSSFCSYDIKSFHRISFDQREILEAMVEKNILGHGGSGTVYRIGLSSGEIVAVKKLWSQNTKDSLSEDQLFPSKELQTEVQTLGSIRHKNIVKLYCYLSSWDCSLLVYEYMPNGNLWDALHKGKILLDWPTRHQIALGVAQGLAYLHHDLLPPIVHRDIKSSNILLDVDNQPKVADFGVAKVLQAKTGKDSSHTVVAGTYGYMDPDYANTSKATTKCDIYSFGVVLMELVTGKKPVEPEFGENKNIINWVSTKVQTKEGAMEILDKRVSGSFTEDMIQVIRIAIRCTARAPAPRPTMSEIVQLLSESDPCRFDSYKSTNKTTDASNTTKINKTLELTL*

Click here to download the sequence:
Link to NCBI Protein BLAST